Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g1133 ATGATAGAGCCAGGGTGCCTGAATCAGGGTCACCCTTGTAGAGCGACAACACTTGTTACTCTTTCATTCTTGTTCTTCACACTAGTGTTCTTCTCCAGCTTCACCAATGCTTTCTCTTCTTCTGTGTATCCGGAATTGAATCCTGTAAAACCTAGACATTCGCGTCTTCTCAGGAGCGCCGTGCAACGTGAAACTCCTGCATCACAGCTTTCTGAACTATGGTCACCTCTGGAAAGCCAAGGATGGAAACCCTATGTCGAACCAAATAAGCCAACATTACCAGAAAAGTCTGAGGGATACATCCAGGTCTTTCTCGATGGAGGTTTGAACCAACAAAGGATGGGGATATGTGATGCAGTTGCTGTCGCAAAGATACTGAATGCTACTCTGGTGATCCCTTACCTTGAATTAAATCCTGTATGGAGAGATTCAAGCTCCTTCATGGACATATTTGATGTAGATCATTTCATTGATGTATTGAAGGATGATATTTCAATAGTTAAAGAGCTTCCTGGAGAGTACTCCTGGAGCACAAGGGAGTACTATGGCTTGGCTATTCGGGAAACCAGAATCAAGGCTGCACCTGTGCATGCATCAGCCCACTGGTATCTCGAGAACGTTTTGCCTGTTCTACAGAGTTATGGTATTGCTGCAATCTCTCCATTTTCTCACCGACTGAGTTTTGACAACTTACCTATGGATATTCAACATCTGCGCTGTAAAGTCAACTTTGAAGCTTTAATCTTTGTTCCTCATATCAGAACACTTGGAGATGCCCTTATCAGCCATCTTCGCTACCCTGATGGCTCAGCTGGACAAATGGGCTACAACGACCTTCAAGAGGTCACTGGTGCAGGTGCTAGTAAAAATGCTGGGAAATTTGTTGTTCTGCACCTCCGATTTGATAAGGATATGGCAGCACATTCAGCCTGCGATTTCGGTGGAGGAAAAGCTGAAAAATTGGCCCTTGCAAAGTATAGACAGGTTATTTGGCAAGGGAGGGTTCTTAACTCTCAATTTACTGACGAAGAACTGAGGAGTCAAGGTCGCTGTCCAATGACTCCAGAAGAGGTTGGATTGTTGCTAGCAGCTCTTGGATTTGACAATAGCACTCGTTTATATCTTGCCTCCCACAAGGTGTATGGTGGAGAAGCAAGGATTTCAACTCTGAGGGAACTGTTTCCTCTGATGGAAGACAAAAAGAGCCTTGCTTCATCTGATCAGCGTGCTCAGATAAAGGGAAAAGCTTCTCTATTAGCTGCACTTGATTACTATGTTGGCTTGCATAGTGACATTTTCATCTCTGCTTCCCCAGGAAACATGCACAATGCACTGGTTGGACACCGTACTTACCTGAACTTAAAGACCATAAGGCCAAATATGGCATTGATGGGTCAGCTTTTCCTGAATAAAACCATAGAATGGTCAGAGTTTCAGGATGCAGTGATTGAAGGTCACCAAAACAGACAAGGCCAACTAAGGATCAGGAAGCCCAAACAATCCATTTACACTTATCCAGCTCCTGATTGCATGTGCCAAGCTTAG 1545 0.4434 MIEPGCLNQGHPCRATTLVTLSFLFFTLVFFSSFTNAFSSSVYPELNPVKPRHSRLLRSAVQRETPASQLSELWSPLESQGWKPYVEPNKPTLPEKSEGYIQVFLDGGLNQQRMGICDAVAVAKILNATLVIPYLELNPVWRDSSSFMDIFDVDHFIDVLKDDISIVKELPGEYSWSTREYYGLAIRETRIKAAPVHASAHWYLENVLPVLQSYGIAAISPFSHRLSFDNLPMDIQHLRCKVNFEALIFVPHIRTLGDALISHLRYPDGSAGQMGYNDLQEVTGAGASKNAGKFVVLHLRFDKDMAAHSACDFGGGKAEKLALAKYRQVIWQGRVLNSQFTDEELRSQGRCPMTPEEVGLLLAALGFDNSTRLYLASHKVYGGEARISTLRELFPLMEDKKSLASSDQRAQIKGKASLLAALDYYVGLHSDIFISASPGNMHNALVGHRTYLNLKTIRPNMALMGQLFLNKTIEWSEFQDAVIEGHQNRQGQLRIRKPKQSIYTYPAPDCMCQA* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g1133 514 PIRSF UCP009360 6 514 IPR024709 -
Vra11g1133 514 Pfam GDP-fucose protein O-fucosyltransferase 100 452 IPR019378 -
Vra11g1133 514 PANTHER O-FUCOSYLTRANSFERASE 2-RELATED 16 513 - -
Vra11g1133 514 CDD O-FucT_plant 100 457 IPR024709 -
Vra11g1133 514 PANTHER O-FUCOSYLTRANSFERASE 39 16 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g1133 Vra-Chr11 11064142 11068784 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g1133 70 513 Miscellaneous Gene Families AT1G22460 33.763 2.96e-86 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g1133 - - gmx:100817796 945.266
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g1133 11 11064142 11068784 Vra11g1133 11 11064142 11068784 ECH