Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g1065 ATGAGAGTTTCTCTCATCCGAACCGGGTCGCTGCCGATCCCGAACCCGTTTTTCCACGGCTCACCTCGATGTTCTCTCACGCGCCAAACCTCTCTCCCCGGCGACAAGAACCACGCGAAATTTTCCACGATTTCAATGCACTATTCCCACTTCAACGCCCGCAGGGACTCACCGCAGAAAGGGATAAACAGAGCCTCATCTGAAGGTGCCCCCGAGAATTTCTTTGTTCGCCGTAATCTGAACTGCACCGGATCGTGCTCGCCCCCGCCGATCATACCTCTCGAAGAACAATTCTTCTCCGACGCCAATTTAGACAAGTCGAGCTATCTCGAGACCCTACGGGAGGATATGGAATCCGGAGGCAGTGACGGTGGCGATCACGGCGATGCGACTGTCACAGGCGGAAACGGTGGCGAGAGGATGAAAATCGATGCGTACTACGAGGAGATGTTGAAGACGAACCCGACGGACGCGCTTCTACTGAGAAACTACGGCAAATTCCTCCAGGAGGTGGAGAAAGACGCGAGGAGAGCAGAGGAATATTACGGAAGAGCAATTCTCGCGAACCCTAGCGATGGCGAATTGCTTTCGCTGTACGGAGCGCTAATATGGGAAACGCAGCGAGATGAAGCGAGAGCCAAATCTTACTTTGACCAAGCCATTCACGCCGCTCCTAATGATTGCACTGTGCTGGGATCGTACGCACACTTCATGTGGGAAGCGGAGGAGGAAGAGGAACTTAACGGAGGTATGACGGAAAAAACGGGGACGGAGATGATCGCTGCTATATAA 792 0.5354 MRVSLIRTGSLPIPNPFFHGSPRCSLTRQTSLPGDKNHAKFSTISMHYSHFNARRDSPQKGINRASSEGAPENFFVRRNLNCTGSCSPPPIIPLEEQFFSDANLDKSSYLETLREDMESGGSDGGDHGDATVTGGNGGERMKIDAYYEEMLKTNPTDALLLRNYGKFLQEVEKDARRAEEYYGRAILANPSDGELLSLYGALIWETQRDEARAKSYFDQAIHAAPNDCTVLGSYAHFMWEAEEEEELNGGMTEKTGTEMIAAI* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g1065 263 Gene3D Tetratricopeptide repeat domain 107 246 IPR011990 GO:0005515
Vra11g1065 263 MobiDBLite consensus disorder prediction 115 138 - -
Vra11g1065 263 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 246 - -
Vra11g1065 263 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 1 246 - -
Vra11g1065 263 SUPERFAMILY TPR-like 145 245 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g1065 Vra-Chr11 9878979 9880378 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g1065 - - gmx:100788211 317.775
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g1065 11 9878979 9880378 Vra11g1065 11 9878979 9880378 ECH