Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g1047 ATGGAAGTGAAAACTGCAAAGGCATTGGATAGGATTGCTCTCAAATTGAAGAGAAAGCGACCTACCCAATATGCTGCACATGAATGTGGAGCTTTGCAGCCTTCAGGCAGGGTGGTAAAACAGATAAAATTGGGTGAATATAGAAAAAAACATGCAAATGCTGGTCCTCATATTGGGAAGTCCTTGAGTAACCGATTTTTAAGTTATAAAAAAAGTGGGAAACCAGCTCGTCTGATGTTCTATAAGAATGGTGAGTGGGTGGACTTTCCAAGTGATATTCTTGACTTGGTTAAGAAAGATCTTGAAATCAAGAAGTCGGTTGTGGAGGTGGAGTTAAATGGGTATCATATGGTTTTAAATTTTTTCCATATGTATAAGTTGAACATGAAAACTGGTCTGCAACAACCAATGGCTTGGATTGATGAGGCAGGAGGCTGCTTCTTCCCTGAGGTCTATGCTGCTTATGATGAAGAGCCTTATAATCTCTGGAAACAGGGCACTGGAAAAAGTAAAGAGCCATATGGTTCTAATGAAATAAAATTACAATTAGAAATTGAAATAAATGGACTGGATCAGTGGAAGTTGAGGGAGTGTTCTGACGAGTCCAATGCGTTATTTAATGGTATTAGAATTGATACTAAACAAAAGAGCTGTCCATATGATGTAGAAGTAGAAAATAGCATTAACAAAGAGGACTGTGAAAATGTTGACGAATCTATACAGCAAAATCAAGAAATAGATTTAGATGCCTATACTGAATCTGTAAATGGAAGGTTGAATTTCGATTCTGTACAGAAGATATTTCTTAAGGGAATGAACAATAATGGCATTACTGATTCTGACATTGTTGGAATTGACCGGTGCTCAGGTGCGTCAATGCAAGCACGATTGGAGCTATTCTTGAAGCAAGCTGAAATTACACAAAAATGTCATGGGGATGCTAATATTCAGTATGCTTGGCTTGCTTCTACTAAACGAGAACTGTATACAATGATGGAGTATGGGCTTGGCCACTGTAGACTATCTGCATTTAAAGGTTCATACGGCACTGGTGTTCATCTTGCAGCCATTACCTGCCCTGACATCAGTGCACGTTATTGTGATGTTGACGAAAATGGGGTTCGACATTTGGTCCTTTGTCGTGTAATAATGGGGAACATGGAGATTCTCCGTCCTGGCACTGGTCAGTTCCAACCCAGTAGCTGTGAATATGATAATGGGGTGGATGACATTGAATGTCCGAGATATTATGTGGTGTGGAATATAAACATGAACACCCACATTTATCCAGAATTTGTAGTTAGCTTCAAGCTGTCGTTTGATGCCGAAGGCTTTTTTGGTGGAAGTGAAAGGAAGAATAATGTTTCTGGGGTTATGACAGCCTGCCATGGTCCTCAAGGACTGTTACATTCTTGTGCAGTAGTTAAGGGCACAGCTCCCCCAAGGGTTCCAACATCGCCTTGGATGTCTTTTCCTTTGCTTTTTGCTGCTATTGGAAACAAGGTTCCTCCTAATGATATGGAACGTGTCAGAGAACATTATGAACAGTTCAGGTCAAAGCAGATATCCCGGGCTGATTTTGTGAAGATACTAAGGTTAATAGTTGGAGATACTCCATTGAAACTTGCAATGACACAACATCAATTTAAGATACCATCTAATGTTAAGGAAGGATAA 1677 0.3983 MEVKTAKALDRIALKLKRKRPTQYAAHECGALQPSGRVVKQIKLGEYRKKHANAGPHIGKSLSNRFLSYKKSGKPARLMFYKNGEWVDFPSDILDLVKKDLEIKKSVVEVELNGYHMVLNFFHMYKLNMKTGLQQPMAWIDEAGGCFFPEVYAAYDEEPYNLWKQGTGKSKEPYGSNEIKLQLEIEINGLDQWKLRECSDESNALFNGIRIDTKQKSCPYDVEVENSINKEDCENVDESIQQNQEIDLDAYTESVNGRLNFDSVQKIFLKGMNNNGITDSDIVGIDRCSGASMQARLELFLKQAEITQKCHGDANIQYAWLASTKRELYTMMEYGLGHCRLSAFKGSYGTGVHLAAITCPDISARYCDVDENGVRHLVLCRVIMGNMEILRPGTGQFQPSSCEYDNGVDDIECPRYYVVWNINMNTHIYPEFVVSFKLSFDAEGFFGGSERKNNVSGVMTACHGPQGLLHSCAVVKGTAPPRVPTSPWMSFPLLFAAIGNKVPPNDMERVREHYEQFRSKQISRADFVKILRLIVGDTPLKLAMTQHQFKIPSNVKEG* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g1047 558 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO1-RELATED 1 551 - -
Vra11g1047 558 ProSiteProfiles PARP catalytic domain profile. 234 457 IPR012317 GO:0003950
Vra11g1047 558 SUPERFAMILY ADP-ribosylation 261 438 - -
Vra11g1047 558 ProSiteProfiles RST domain profile. 482 553 IPR022003 -
Vra11g1047 558 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 1 551 IPR044964 -
Vra11g1047 558 Pfam RCD1-SRO-TAF4 (RST) plant domain 484 548 IPR022003 -
Vra11g1047 558 Gene3D - 256 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g1047 Vra-Chr11 9649477 9657506 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g1047 - - aprc:113869887 812.372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g1047 11 9649477 9657506 Vra11g1047 11 9649477 9657506 ECH