Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g1016 ATGGATCAAAATAGAGAAGAGAGTTGGAGGGAATTAATGAAGAAGATGCTTCCTCCTGGTGCTTCCATACCTGATGATGCTTCTAATCTTGATTACTCCATAGCTATGGAATATGTTGGTCCACCAGTTTCATACGAATTGCCAAAAGTTGAGCCTCTTGATGGAAACTCAAGAGCAATTCCCGCTGCTGAGCCACTCTCTGGATCACAAAGATCAAATACTCATGTGGGGTCTATGGTGATTGAGCCAATCCCTCTGCCAGTGTCTCGTATTGCCGGTGTAACAAGTTCTCCTAATCAAAGTCCGAGGGTGTCAGGAAGCTCAGATTCTGTGGTTTCTGTCTTACAAAACCCAGATCTTTCTTCCGCTTCACCATCCGCTTCACCTGCTTCAGTTCATAATCCTCCACAGCCGGTGGTTAATGAAGTGAAGAGAGCACCGGTTGTCACTTTTAATACTGTTGATAGATCTCAGAGGAAAGAAGTGGAGGTTGTGAAGCCAGTTTATTCTGAATATGTTGGAGTTTTGAAGGAAAGGAAGAAAAAGAAAATAAGAGTTTGTTATAGGTGTGGAAAAGGGAAGTGGGAAACTAAGGAGTCTTGCATAGTGTGTAATGCCAAGTACTGCAGCAACTGTGTGCTAAGGGCAATGGGATCAATGCCTGAAGGACGCAAATGTGTAACATGCATTGGTCAACCAATTGATGAATCAAAGCGTCTAAAACTTGGTAAATATTCAAGGGTGTTGTCCAGATTGTTAAGTCCTCTAGAAGTCAAGCAAATTATGAAAGCAGAGAAAGAATGTTCTGCTAATCAGCTTCGGCCGGAGCAGCTTATCGTCAATGGGTTGCCCCTCAAGCCGGATGAGATGGCCGAATTACTTGGATGCCTGCTACCTCCACGTAAACTAAAACCTGGTAGATATTGGTATGACAAAGAATCTGGTCTCTGGGGAAAGGAAGGGGAAAAACCTGACAGAATCATAAGTTCAAACCTGAATTTCACTGGGAAACTTAGCCTCAATGCTAGTAACGGAAACACCGAGGTTTACATGAATGGTCGAGAGATCACAAAACTTGAACTGAGGGTACTCAAACTGGCAAATGTGCAGTGTCCTCGTGATACACACTTTTGGGTTTATGATGATGGTCGTTATGAGGAGGAAGGTCAAAATAATATCAGAGGAAACATTTGGGAGAAGGCCTCAACAAGATTCATATGTGCCTTATTCTCTCTACCCTTTCCCCATGGTCAGCCTCATGGGCTAAAGGATGAAACTAGTCACTATACCACAGTTCCTATTTATCTGGAACAGAAAAAAACTCAGAAGCTTCTTCTTCTTGGAATACAAGGATCTGGTACTAGCACTATTTTTAAGCAGGCGAAGTTTTTGTATGGAAACAAGTTTTCTGCTGAAGAGCTGCAGGATGTCAAACTGATGATCCAGAGTAACATGTATAAATATCTTAGTATTCTACTCGACGGGAGAGAGCGCTTTGAAGAGGAGGCTGTTTCTAGAATGAATGAACAAGCTTCTCCTGGTCAAACTATGGAAACAAGTAGCAATGGTGAAAGTAGTACTAGTGAATGCATCTATTCCCTCAACCCAAGGCTAAAACATTTCTCTGACTGGCTCCTGGACATTATAGCCACTGGGGATTTAGATGCCTTCTTCCCTGCCGCCACACGTGAATATGCACCATTAGTTGAAGAAGTATGGAAGGATCCTGCCATACAAGAAACCTTCAAAAGAAAAGAGGAGCTTCACTTTCTTCCTGATGTTGCTGAGTACTTCTTAAGCCGGGCTGTGGAGATATCTAGTAATGAATACGAACCTTCTGAAAGGGACATAGTATATGCAGAAGGGGTCACTCAGGGAAATGGTTTGGCTTTCATGGAGTTTTCACTTGATGACCGTGTTGCTAAGTCGGATACTTACTCAGATAATCTCGATGCTCAGCTGCCACCACTGACTAAGTATCAACTCATAAGAGTGAATGCCAAGGGCCTCAATGAGGGCTGCAAGTGGGTTGAAATGTTTGAAGATGTTCGAGCTGTGGTGTTTTGTGTTTCCCTAAGTGACTATGATCAGTTGTGGCTTTCCCCAGACAGTAATGGCAGTGGAACACTTGTTCAAAACAAGATGGTACAAAGCAAGGAGCTTTTCGAGACGATGGTGAGACACCCTTGCTTCAAAGACACCCCTTTGGTCCTGGTCCTTAACAAGTATGATATCTTTGAGGAAAAGATCAGCAGGGTGTCCCTGAATACATGTGAATGGTTCAGTGATTTTTGTCCCGTGCGTGCATACCATAATAACCAGTCACTGGCCCATCAGGCCTACTTCTATGTTGCTATGAAATTCAAGGACCTTTATGCATCCCTCACAGGGAAAAAACTCTTTGTGGCACAAGCCAGGGCAAGGGAACGAGTCACTGTTGATGAGGCATTCAAGTACATAAAAGAGGTCCTCAAATGGGATGAAGAGAAGGAGGAAAATTTCTATGGTCCACCTGAGGATTCATTTTACAGCACAACAGACATAAGCTCCTCTCCCTTTGTCAGACAAGAGTGA 2574 0.4336 MDQNREESWRELMKKMLPPGASIPDDASNLDYSIAMEYVGPPVSYELPKVEPLDGNSRAIPAAEPLSGSQRSNTHVGSMVIEPIPLPVSRIAGVTSSPNQSPRVSGSSDSVVSVLQNPDLSSASPSASPASVHNPPQPVVNEVKRAPVVTFNTVDRSQRKEVEVVKPVYSEYVGVLKERKKKKIRVCYRCGKGKWETKESCIVCNAKYCSNCVLRAMGSMPEGRKCVTCIGQPIDESKRLKLGKYSRVLSRLLSPLEVKQIMKAEKECSANQLRPEQLIVNGLPLKPDEMAELLGCLLPPRKLKPGRYWYDKESGLWGKEGEKPDRIISSNLNFTGKLSLNASNGNTEVYMNGREITKLELRVLKLANVQCPRDTHFWVYDDGRYEEEGQNNIRGNIWEKASTRFICALFSLPFPHGQPHGLKDETSHYTTVPIYLEQKKTQKLLLLGIQGSGTSTIFKQAKFLYGNKFSAEELQDVKLMIQSNMYKYLSILLDGRERFEEEAVSRMNEQASPGQTMETSSNGESSTSECIYSLNPRLKHFSDWLLDIIATGDLDAFFPAATREYAPLVEEVWKDPAIQETFKRKEELHFLPDVAEYFLSRAVEISSNEYEPSERDIVYAEGVTQGNGLAFMEFSLDDRVAKSDTYSDNLDAQLPPLTKYQLIRVNAKGLNEGCKWVEMFEDVRAVVFCVSLSDYDQLWLSPDSNGSGTLVQNKMVQSKELFETMVRHPCFKDTPLVLVLNKYDIFEEKISRVSLNTCEWFSDFCPVRAYHNNQSLAHQAYFYVAMKFKDLYASLTGKKLFVAQARARERVTVDEAFKYIKEVLKWDEEKEENFYGPPEDSFYSTTDISSSPFVRQE* 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g1016 857 MobiDBLite consensus disorder prediction 92 135 - -
Vra11g1016 857 PRINTS Alpha G protein (transducin) signature 443 458 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Vra11g1016 857 PRINTS Alpha G protein (transducin) signature 610 632 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Vra11g1016 857 PRINTS Alpha G protein (transducin) signature 683 711 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Vra11g1016 857 PRINTS Alpha G protein (transducin) signature 736 745 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Vra11g1016 857 MobiDBLite consensus disorder prediction 507 526 - -
Vra11g1016 857 PANTHER GTP-BINDING PROTEIN ALPHA SUBUNIT 19 853 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Vra11g1016 857 MobiDBLite consensus disorder prediction 839 857 - -
Vra11g1016 857 SMART galpha_1 423 813 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Vra11g1016 857 CDD G-alpha 442 827 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Vra11g1016 857 MobiDBLite consensus disorder prediction 833 857 - -
Vra11g1016 857 Gene3D - 636 834 IPR027417 -
Vra11g1016 857 MobiDBLite consensus disorder prediction 92 138 - -
Vra11g1016 857 SUPERFAMILY Transducin (alpha subunit), insertion domain 469 620 IPR011025 GO:0007165
Vra11g1016 857 PANTHER EXTRA-LARGE GUANINE NUCLEOTIDE-BINDING PROTEIN 3 19 853 - -
Vra11g1016 857 MobiDBLite consensus disorder prediction 508 526 - -
Vra11g1016 857 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 438 830 IPR027417 -
Vra11g1016 857 Gene3D - 471 621 IPR011025 GO:0007165
Vra11g1016 857 Pfam G-protein alpha subunit 438 823 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Vra11g1016 857 ProSiteProfiles G-alpha domain profile. 440 835 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Vra11g1016 857 SUPERFAMILY FYVE/PHD zinc finger 161 230 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g1016 Vra-Chr11 9083327 9090270 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g1016 - - gmx:100794534 1608.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g1016 11 9083327 9090270 Vra11g1016 11 9083327 9090270 ECH