Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g1007 ATGAATCGCAACCACGATCCCAATCCGTTTGACGAGGAAGAAGTGAATCCTTTCTCGAATCGTGCACGTAGTCCACCAGTAGCATCTGAACCACTGGGTTATGGTCAAAGACATGATGCTACAGTTGATATTCCTTTGGATACTACAAATGACTCGAAGAAAAAAGGTCAGGAGCTAGCAGCTTGGGAAGCAGATTTAAAACGGAGAGAGAAGGAAATTAAAAAAAGAGAAGAGGCTGTTGCTAGAGCTGGTGTTCCTGTTGATGATAAGAATTGGCCTCCATTGTTCCCAATCATTCACCATGATATTGCAAATGAGATACCTGTTCATGCTCAGAGGCTGCAATATTTGGCCTTTGCAAGTTGGTTAGGAATTGTTCTCTGCCTAGTTTTTAATGTAGTTGCTGTAATTGTCTGTTGGATAAGAGGCGGTGGTGTTAAAATTTTTTTCCTTGCGGTGATATATGCTCTAATGGGTGTTCCCCTTTCATATGTTCTTTGGTACAGGCCTCTCTATCGTGCTATGAGGACGGATAGTGCACTGAAGTTTGGTTGGTTTTTCATGTTCTACTTGCTTCATATTGCATTTTGCATATTTGCTGCAATCGCCCCTCCAGTTGTTTTTCATGGGAAATCATTGACGGGTATCCTTGCTGCAATTGATGTCTTCTCAGACCATGTATTGGTTGGGATTTTCTATTTGATTGGATTCGGGATGTTTTGCTTGGAGGCTCTTCTAAGCTTATGGGTACTCCAGAAAATATACATGTATTTCCGAGGGCATAAGTGA 789 0.417 MNRNHDPNPFDEEEVNPFSNRARSPPVASEPLGYGQRHDATVDIPLDTTNDSKKKGQELAAWEADLKRREKEIKKREEAVARAGVPVDDKNWPPLFPIIHHDIANEIPVHAQRLQYLAFASWLGIVLCLVFNVVAVIVCWIRGGGVKIFFLAVIYALMGVPLSYVLWYRPLYRAMRTDSALKFGWFFMFYLLHIAFCIFAAIAPPVVFHGKSLTGILAAIDVFSDHVLVGIFYLIGFGMFCLEALLSLWVLQKIYMYFRGHK* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g1007 262 Coils Coil 59 79 - -
Vra11g1007 262 MobiDBLite consensus disorder prediction 1 56 - -
Vra11g1007 262 Pfam SCAMP family 90 260 IPR007273 GO:0015031|GO:0016021
Vra11g1007 262 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 1 262 IPR007273 GO:0015031|GO:0016021
Vra11g1007 262 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN 4 1 262 - -
Vra11g1007 262 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g1007 Vra-Chr11 8997953 9003773 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g1007 1 262 Miscellaneous Gene Families AT1G32050 76.136 2.34e-154 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g1007 K19995 - gmx:100806586 488.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g1007 11 8997953 9003773 Vra11g1007 11 8997953 9003773 ECH