Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0998 ATGGGAAAGAGCAAGGTTCTTGTTGTGGGGGGAACTGGGTATGTGGGAAGGAGGATAGTGAAGGCAAGTCTAGAACAAGGGCATGAAACCTATGTTCTTCAACGTCCAGACTTAGGGTTAGATATCGACAAGTTGCAGATGCTGCTTTCATTCAAGAAGCAAGGTGCTCATCTTGTGAAGGCTTCTTTTTCTGATCACCAGAGCTTGGTGGATGCTGTGAAACTTGTCGATGTTGTCATTTGCACCATGTCTGGAGTTCATTTTCGCTCTCACAACTTGTTGTTGCAGCTTCAACTTGTTGAGGCCATCAAAGTTGCAGGAAATGTCAAGCGTTTTCTGCCTTCAGAATTTGGCATGGACCCTTCACTTATGGGGCATGCACTTGAACCGGGAAGAGTGACATTCGATGAGAAAATGACTGTACGGAAAGCAATTGAAGATGCCAACATCCCTTTCACTTACATCTCTGCTAACTGCTTTGCTGGCTATTTTGTTGCTAATCTGTCTCAAATGGGGACCCTTCTCCCTCCACGAGACAAGGTCATTCTCTATGGTGATGGCAATGTCAAAGCTGTTTTCATGGATGAAGATGATGTTGCAACGTACGCAATCAAGACAATCGATGATCCTCGAACACTGAACAAGACTGTATACCTAAGACCACCAGAAAACATTCTCACTCAAAGACAGCTAATTGAGAAGTGGGAAAAGCTCATAGGGAAGCAACTAGAGAAGTCCAGCATAAATGAACAAGATTTTCTTGCTTCCATGAAAGGTTTGGACTATGCATCACAAGTGGGAGTGGGGCATTTCTACCATCTTTTCTATGAAGGGTGTTTGACAAACTTTGAAATAGGAGAAGGTGGAGAAGAAGCATCAGCACTTTATCCAGAGGTGAATTACACTCGCATGGATGAATACCTTAAAGTGTATGTGTGA 939 0.4356 MGKSKVLVVGGTGYVGRRIVKASLEQGHETYVLQRPDLGLDIDKLQMLLSFKKQGAHLVKASFSDHQSLVDAVKLVDVVICTMSGVHFRSHNLLLQLQLVEAIKVAGNVKRFLPSEFGMDPSLMGHALEPGRVTFDEKMTVRKAIEDANIPFTYISANCFAGYFVANLSQMGTLLPPRDKVILYGDGNVKAVFMDEDDVATYAIKTIDDPRTLNKTVYLRPPENILTQRQLIEKWEKLIGKQLEKSSINEQDFLASMKGLDYASQVGVGHFYHLFYEGCLTNFEIGEGGEEASALYPEVNYTRMDEYLKVYV* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0998 312 PANTHER PINORESINOL REDUCTASE-RELATED 2 309 - -
Vra11g0998 312 Gene3D - 4 297 - -
Vra11g0998 312 CDD PCBER_SDR_a 5 307 IPR045312 GO:0016491
Vra11g0998 312 Pfam NmrA-like family 6 299 IPR008030 -
Vra11g0998 312 Gene3D - 158 308 - -
Vra11g0998 312 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 258 IPR036291 -
Vra11g0998 312 PANTHER BIFUNCTIONAL PINORESINOL-LARICIRESINOL REDUCTASE-LIKE 2 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0998 Vra-Chr11 8900021 8903385 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0998 K21568 - gmx:100775382 585.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0998 11 8900021 8903385 Vra11g0998 11 8900021 8903385 ECH