Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0924 ATGCCGTCGTCCCACCGCGACCATGGCCAGGCGGCCGAGTACCAGAACCAGAACCAGAACCAGCACCACCCCCACCACTACAGAAGAAAATTGGTAAACACTCATCATGACCGCAACACACACCCTTTGATCTGGCTGGCGGCAATTCTCTGCACGATCATAGCCATAGGTGTTGTAGTAGCAGGCATAGTGGTTTTCGTGGGTTATATGGTGATCCACCCGAGAATCCCTGTGATAAGCGTCACCAAAGCTCACCTTGACCTTCTAAGCAACGACTACGCTGGTCTTCTCCAAACTCAACTCACCATCATCGTGGTGGCCCAGAACGGGAACGCCAGGGCCCATGCAACATTCTCCGACATAAACTTCAACCTCAGCTACCAGGGCCAGCCGATAGCAAGGATGGTTGCCGAAACCTTTGATGTTCCCAGGAACAGCTCCAAGACTCTGAACTACGTTGTTCGGTCTGCTTCCATCCCCTTGACACCTGACCAGATGGAGGAAGTGGATGAGTCATGGAAGCGTGACGTGATAGGGTTTGACTTGAAAGGAAGCGCGAGAACAAGGTGGAGAGTAGGAGCCTTAGGTTCAGTTAAGTTCTGGAGCAACTTGGAGTGTGAACTCAAGTTTCGCCCTTCCAATGGGAGTTACATTAAGCACTCACGCTGCACCTCTGAGTCCAAATGA 687 0.5197 MPSSHRDHGQAAEYQNQNQNQHHPHHYRRKLVNTHHDRNTHPLIWLAAILCTIIAIGVVVAGIVVFVGYMVIHPRIPVISVTKAHLDLLSNDYAGLLQTQLTIIVVAQNGNARAHATFSDINFNLSYQGQPIARMVAETFDVPRNSSKTLNYVVRSASIPLTPDQMEEVDESWKRDVIGFDLKGSARTRWRVGALGSVKFWSNLECELKFRPSNGSYIKHSRCTSESK* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0924 228 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 15 228 - -
Vra11g0924 228 Pfam Late embryogenesis abundant protein 107 206 IPR004864 -
Vra11g0924 228 MobiDBLite consensus disorder prediction 1 25 - -
Vra11g0924 228 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 15 228 - -
Vra11g0924 228 Gene3D - 60 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0924 Vra-Chr11 8001134 8002328 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0924 - - gmx:100819030 358.221
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0924 11 8001134 8002328 Vra11g0924 11 8001134 8002328 ECH
Vra11g0924 11 8001134 8002328 Vra7g0296 7 4539073 4540152 PCT