Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0921 ATGGTGGAAAGTCCTCCTAAATTCAAATTCACATTTATCTTCTTCATCATCTTCTCCCTCTCTCTTGGCTTAGTTTCCTTCTCCTTGTGCATAGCCTCTGAGATTAAGAGGAACAAGAAGGAGGATCTCAGATGGAATGGGAGACTGTGTCATTTACCGTCAAGTCCAGCATTTGGATTGGGAATTGCATCATTGGTTTGTTTGGCTTTGGTGCAGAGCATTGGGAATTCTATATTGTTCAAGAATTGCTGTTCAGGAGGGAAAAGAAACGCTCGGTTTAAGATACCTATCGTTGCAAGGATTCTGCTTTTGATCTCTTGGGTTGGGTTTGGAATTGCAGTTATTTTATTAATTGCTGCGACAAGCATGAGCAAAAGGCAAGCATATGGGGAAGGGTGGTTGAAAGGTGAATGCTACCTTGTCAAAAAAGGGACATACGCTGGTTTAGCCATATTGATTTTAGTTACAGTAGGATCATTAATTGGTTCAGGGTTGTTAACAATGAAGACCAATAAGGCAGATCAAGGTCACAAAATACACGCACAAACGGGTGAAACTAGGGATTAA 567 0.4092 MVESPPKFKFTFIFFIIFSLSLGLVSFSLCIASEIKRNKKEDLRWNGRLCHLPSSPAFGLGIASLVCLALVQSIGNSILFKNCCSGGKRNARFKIPIVARILLLISWVGFGIAVILLIAATSMSKRQAYGEGWLKGECYLVKKGTYAGLAILILVTVGSLIGSGLLTMKTNKADQGHKIHAQTGETRD* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0921 188 Pfam Protein of unknown function (DUF1218) 65 157 IPR009606 -
Vra11g0921 188 PANTHER OS07G0462200 PROTEIN-RELATED 9 180 - -
Vra11g0921 188 PANTHER PROTEIN MODIFYING WALL LIGNIN-1 9 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0921 Vra-Chr11 7952814 7956024 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0921 - - gmx:100779666 268.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0921 11 7952814 7956024 Vra11g0921 11 7952814 7956024 ECH
Vra11g0921 11 7952814 7956024 Vra7g0299 7 4611517 4612791 PCT