Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0918 ATGGAGCAGCTGAAGACGCTGGGTAGAGAACTTGCAATGGGGTCGCACGGGCAGTCGAAGGAGTTTCTGGACCTCATCAAGTCCATCGGCGAGGCCCGATCCAAGGCGGAGGAGGACCGCATCGTCCTCCGCGAGATCGAAACCCTAAAGCGACGCATCAACGACGCAGACACGCCCAAGCGCAAGATGAAGGAGTACATCATCCGCCTCCTCTACGTCGAGATGCTCGGCCACGACGCCTCCTTCGGCTACATTCACGCCGTCAAGATGACTCACGACGACGCCCTCCTCCTCAAGCGCACGGGATACCTCGCCGTCACCCTCTTCCTTAGCGACGATCACGACCTCATCATCCTCATCGTTAACACTATCCAGAAAGATCTCGCCTCTGATAACTACCTCGTCGTCTGCGCCGCCCTCAACGCCGTCTGCCGCCTCATCAACGAGGAGACCATTCCCGCTGTCCTCCCCCGCGTCGTCGACCTCCTTAACCACCCCAAGGACGCTGTCCGGAAGAAGGCCGTTATGGCGCTGCATCGCTTTTACCAGAAATCTCCCTCCTCCGTCTCCCATCTGTTAACCAATTTTCGAAAGCGCTTGTGCGATAACGATCCCGGAGTCATGGGAGCTTCTCTTTGCCCTCTCTTTAATCTCGTCTCGGACGATGCTAATTCTTACAAGGATCTCGTCGTTAGCTTCGTCAACATTCTTAAACAGGTCGCAGAACACCGGTTGCCCAAGACTTATGATTATCATCAAATGCCTGCACCCTTCATTCAGATTAAGATGCTGAAAATTCTGGCATTGTTGGGAAGTGGTGACAAGCAGGCTAGTGGACACATGTACACCGTGCTCGGTGATATAATTAGGAAGAGTGATTCCATGACCAACATAGGGAATGCTGTTCTCTATGAGTGTATATGCTGTGTTGCTTCTATATATCCCAATCCTAAGTTATTAGAGGCTGCAGCGGATGTGATTGCCAAATTTTTGAAGAGTGACAGTCATAATCTCAAGTACATGGGTATTGATGCCCTTGGTCGGTTGATAAAGTTAAGTCCACAAATTGCAGAACAACACCAACTGGCCGTCATTGACTGCTTAGAGGACCCTGATGATAGTCTGAAACGAAAAACTTTTGAACTGTTATACAAAATGACCAAGTCTTCCAATGTGGAAGTGATTGTTGACAGAATGATTGATTACATGATTAGCATAAGTGATGACCATTATAAAACCTATATAGCATCTCGATGTGTGGAACTTGCTGAGCAATTTGCACCAAGTAATCATTGGTTTATACAGACCATGAATAAAGTTTTTGAGCATGCTGGAGATCTTGTTAATGTTAAAGTAGCACATAATTTAATGCGGTTGATTGCTGAAGGATTTGGGGAGGATGATGATGCTGCAGATAGTCAGTTGAGATCATCTGCTGTTGAGTCATATTTGCGCATTATTGGAGAGCCCAAGCTTCCTTCTGTGTTTCTTCAAGTCATCTGTTGGGTTCTTGGGGAATATGGAACAGCCGATGGAAAGTATTCTGCTTCATACATCAGTGGAAAGTTATGTGACATTGCAGAGGCATATTCTAATGATGAAAATGTCAAGGCTTATGCAATTTCAGCATTGATGAAAATTTATGCGTTTGAAGTGGCAGCTAGGAGGAAAGTGGATATCCTACCTGAGTGTCAATCTTTGATTGAAGAATTATTGGCATCCCATTCTACAGATTTGCAGCAACGTGCTTATGAATTGCAGGCCCTTATAGGTTTGGGAGCACAAGCAATTGAAACAATAATGCCAAGAGATGCAAGTTGTGAAGACATTGAGGTTGACAATAATCTTTCTTTCCTCGATGGGTATGTTCGGCAATCTCTGGAAAGGGGTGCTCAAGCCTATATTCCCGAGGATGAGCGTACTGGAATGGGGAATATGAACAATTTCAGAAGCCAGGATCACAATGAATCTTTGCAGCATGGTCTAAGATTTGAGGCATATGAAGTTCCAAAGGCTCCAATGCAACTGAAAGCTACTCCAGCTTCATTTGCATCCTCAGCAGACATTGTTCCGGTACCTGAGGTACTTTCTACCAGGGAAACTCACCATATTTCATCAGCGGGATCAACATCAGAAGCTGGATCGTCAGAGCTTAAGCTAAGGCTTGATGGTGTTCAGAAGAAGTGGGGTAGGCCTACTTATTCGTCTTCAGCTTCTTCTGCTTCTGATTCTTATTCTACATCCCAAAAGTCAACAAATGGGGCGGCACAGGTGGATGGTGCTACAGCTGTTAATTCAAAAGTACGTGATAGTTATGATTCAAGAAAGACGCAGGTTGAGATTAATCCAGAAAAGCAAAAGCTTGCTGCTTCATTGTTTGGTGGTTCAACTAAAACTGAGAAAAGATTATCTACAGGCCATAAGGTTCCAAAATCTAATGCTGCAGACGGAGCTCAGGGATCAAAGGCTGCTGTTGTACCCAATGAGGTAGCTGTGGAAAAAACAATTCATCAACCCCCTCCTCCTGATTTGCTTGACTTGGGTGAATCAGCTGACACTACAGCTCCTGCCTCTGTGGATCCATTCCAGCAATTAGAAGGACTTTATGACCCAAGCATTAATTCTGGAATAGGTCATAATGTAGGTGCTACTACAAATGCCCCTGATATTATGGGATTGTATTCGGAGAGTACTGGCAGTGGTGGCTATTCTATACCTGTAAGTGGGAATAATGTAAATCTTTTATCTGAATTGTCCAATCCAGCTGTAAAAGCTACTAGTGGAGAAACAATTACGACGCCTTTGCCCCAGTCTATTAAGGGTCCAAATGCTAAAGATTCGTTGGATAAGGATGCACTAGTGAGGCAGATGGGTGTGAACCCCTCAAGTCAGAATCCTAACTTGTTCAGTGACTTGCTTGGCTAA 2925 0.4544 MEQLKTLGRELAMGSHGQSKEFLDLIKSIGEARSKAEEDRIVLREIETLKRRINDADTPKRKMKEYIIRLLYVEMLGHDASFGYIHAVKMTHDDALLLKRTGYLAVTLFLSDDHDLIILIVNTIQKDLASDNYLVVCAALNAVCRLINEETIPAVLPRVVDLLNHPKDAVRKKAVMALHRFYQKSPSSVSHLLTNFRKRLCDNDPGVMGASLCPLFNLVSDDANSYKDLVVSFVNILKQVAEHRLPKTYDYHQMPAPFIQIKMLKILALLGSGDKQASGHMYTVLGDIIRKSDSMTNIGNAVLYECICCVASIYPNPKLLEAAADVIAKFLKSDSHNLKYMGIDALGRLIKLSPQIAEQHQLAVIDCLEDPDDSLKRKTFELLYKMTKSSNVEVIVDRMIDYMISISDDHYKTYIASRCVELAEQFAPSNHWFIQTMNKVFEHAGDLVNVKVAHNLMRLIAEGFGEDDDAADSQLRSSAVESYLRIIGEPKLPSVFLQVICWVLGEYGTADGKYSASYISGKLCDIAEAYSNDENVKAYAISALMKIYAFEVAARRKVDILPECQSLIEELLASHSTDLQQRAYELQALIGLGAQAIETIMPRDASCEDIEVDNNLSFLDGYVRQSLERGAQAYIPEDERTGMGNMNNFRSQDHNESLQHGLRFEAYEVPKAPMQLKATPASFASSADIVPVPEVLSTRETHHISSAGSTSEAGSSELKLRLDGVQKKWGRPTYSSSASSASDSYSTSQKSTNGAAQVDGATAVNSKVRDSYDSRKTQVEINPEKQKLAASLFGGSTKTEKRLSTGHKVPKSNAADGAQGSKAAVVPNEVAVEKTIHQPPPPDLLDLGESADTTAPASVDPFQQLEGLYDPSINSGIGHNVGATTNAPDIMGLYSESTGSGGYSIPVSGNNVNLLSELSNPAVKATSGETITTPLPQSIKGPNAKDSLDKDALVRQMGVNPSSQNPNLFSDLLG* 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0918 974 MobiDBLite consensus disorder prediction 730 760 - -
Vra11g0918 974 PANTHER AP-4 COMPLEX SUBUNIT EPSILON-1 12 970 - -
Vra11g0918 974 PIRSF AP4_epsilon 10 700 IPR017109 GO:0015031|GO:0030124
Vra11g0918 974 PIRSF AP4_epsilon 695 836 IPR017109 GO:0015031|GO:0030124
Vra11g0918 974 PIRSF AP4_epsilon 925 974 IPR017109 GO:0015031|GO:0030124
Vra11g0918 974 Gene3D - 9 603 IPR011989 -
Vra11g0918 974 MobiDBLite consensus disorder prediction 835 857 - -
Vra11g0918 974 SUPERFAMILY ARM repeat 36 632 IPR016024 -
Vra11g0918 974 MobiDBLite consensus disorder prediction 729 822 - -
Vra11g0918 974 PANTHER ADAPTIN, ALPHA/GAMMA/EPSILON 12 970 - -
Vra11g0918 974 Pfam Adaptin N terminal region 46 591 IPR002553 GO:0006886|GO:0016192|GO:0030117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0918 K12400 - gmx:100819573 1713.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0918 11 7902184 7918083 Vra11g0918 11 7902184 7918083 ECH