Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0912 ATGACCTTCTCGGAGGACGAGGACGAGACTCTGGCCCAATTTCTGGAATCAGAGGTTCTCTCGGAGGCATCTGACAAGGAAGAGGAAACTGGGGAGGAACCAAAAGCAAAGAGAAAGCGCGTAACGGAGGATGAGAGTACTAAAGGAAAAGAAATTTCTGATTCATCTCGCACACGGAAGAGCATTGTTGTAAACAATACGGTGTTGCCGAGAAGGATTGACACTGGTTGTTTCAGCAAAGTTCCACCCGAGCTTTTCCATCATATCCTTAAATTTCTGTCTTCTGAGGATCTTGTTTCTTGTTCCTTAGTCTGTAGGTTTCTAAACTGTGCCGCATCAGATGAGTCATTGTGGCGTCGTCTGTACTGTATGCGATGGGGTCTTCTCCCCCCTACCCGGAAGTTAAGGGAATGCCCATGGAAGAAGTTATACATTCAGCGTGATGGAGAGGACATGGTTGAACTTGTTAGGAACTGCCAAAATGAGTTTAAGGAGTACTACATTCAAATGCAAGCAGCTAAGCGAAGTCAAGCTCCTCTTCCTTCACAGTTGAAGGACGATAGGATAATTCTTGACAAAACATTAGCTGATCAAGTGGCATCATGGAAAAGCAGCAGAGGCCTAAGTGATGTAGTGGTGGCTGATCATACTTGTTCTGGGGAAAATTGCTCTTACTACCAAATTGGAGATGTATTTATTTGTGAGAAGACTGGACAAGTTCATGTTTGTGACGATACATGTAGAGAAGTAATTATGGATCCCACAAATGAGCTTTTGGTATGTACAATATCAGGTCACTGTTTTGATAGATTGTTGTCACCTTCCGAAATGGAGCCTGATGCTGAGCAGCAGCAAGGTGGTGGAACTGATGAGGCAGAACCATTTATGGGATCTGGCCGTTTTGCACGAGCTTATTTGCTGGGGTACAACTGTGCTGATGAAAAGGAGCTTGAAGCTACTTTGAGGTTTTGCTGA 975 0.4441 MTFSEDEDETLAQFLESEVLSEASDKEEETGEEPKAKRKRVTEDESTKGKEISDSSRTRKSIVVNNTVLPRRIDTGCFSKVPPELFHHILKFLSSEDLVSCSLVCRFLNCAASDESLWRRLYCMRWGLLPPTRKLRECPWKKLYIQRDGEDMVELVRNCQNEFKEYYIQMQAAKRSQAPLPSQLKDDRIILDKTLADQVASWKSSRGLSDVVVADHTCSGENCSYYQIGDVFICEKTGQVHVCDDTCREVIMDPTNELLVCTISGHCFDRLLSPSEMEPDAEQQQGGGTDEAEPFMGSGRFARAYLLGYNCADEKELEATLRFC* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0912 324 Gene3D - 63 152 - -
Vra11g0912 324 Pfam UL92 family 223 284 IPR004289 -
Vra11g0912 324 MobiDBLite consensus disorder prediction 1 58 - -
Vra11g0912 324 ProSiteProfiles F-box domain profile. 75 121 IPR001810 GO:0005515
Vra11g0912 324 Pfam F-box-like 80 123 IPR001810 GO:0005515
Vra11g0912 324 SUPERFAMILY F-box domain 71 147 IPR036047 GO:0005515
Vra11g0912 324 MobiDBLite consensus disorder prediction 28 57 - -
Vra11g0912 324 PANTHER F-BOX ONLY PROTEIN 3 69 267 - -
Vra11g0912 324 PANTHER F-BOX ONLY PROTEIN 3 268 324 - -
Vra11g0912 324 SMART fbox_2 81 121 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0912 Vra-Chr11 7828932 7832148 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0912 - - gmx:100778591 586.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0912 11 7828932 7832148 Vra11g0912 11 7828932 7832148 ECH