Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0910 ATGGCGCTAACTAGGGTTTTCGGTGCGACCGCTGGCAGGGCATTCATGGCGGCGGCGGCGAAGAGCGCGGCCAAGGTAAAAGCTTCTCCATCAGGCGGAGCAGCTGCAAAACCCGCGGGGAAGAAGACAGCCATGGTTAGAACCAACACCGGCATACAGAAGGCGGTTCCGGTCTCTTCCGAGCTCGGCAACTTCGTCGGCGCTTCTGAAGTGTCGCGAACTGTTGCGGTTAAAAAAGTGTGGGAGTACATCAAGCAGCAGAATCTTCAGAATCCTTCAAATAAGAAGGAGGTCTTTTGTGATGCAAAGCTGAAGACTATTTTTGGTGGGAAGGATAAGGTTGGGTTCACAGAGATTGCTAGATTGCTGTCTAGTCATTTCGGGAAATCAGGCTGA 396 0.5227 MALTRVFGATAGRAFMAAAAKSAAKVKASPSGGAAAKPAGKKTAMVRTNTGIQKAVPVSSELGNFVGASEVSRTVAVKKVWEYIKQQNLQNPSNKKEVFCDAKLKTIFGGKDKVGFTEIARLLSSHFGKSG* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0910 131 CDD SWIB-MDM2_like 56 127 - -
Vra11g0910 131 SUPERFAMILY SWIB/MDM2 domain 45 129 IPR036885 -
Vra11g0910 131 PANTHER SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D 9 129 - -
Vra11g0910 131 Gene3D SWIB/MDM2 domain 46 131 IPR036885 -
Vra11g0910 131 Pfam SWIB/MDM2 domain 55 127 IPR003121 -
Vra11g0910 131 ProSiteProfiles SWIB/MDM2 domain profile. 51 129 IPR003121 -
Vra11g0910 131 SMART swib_2 52 131 IPR019835 -
Vra11g0910 131 PANTHER EXPRESSED PROTEIN-RELATED 9 129 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI/SNF-BAF60b Vra11g0910 SWIB 7e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0910 - - gmx:100795307 152.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0910 11 7811789 7813669 Vra11g0910 11 7811789 7813669 ECH