Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0903 ATGGTCCCTAAACCAGTCATAGTGACAGGACCACCACCACCAGTCTCTTCTCCGCCCAACCCTCTCCTAAAAACCGCAGTATCAACCGTTAAAACAGAAGAAAAACCCCAAACCACCACCCTTCCCCCACCGTCTACCACCACTCCGAAAACGACGCCGCAGCAGCGACTGGAACTAAAAAGGAAAACGAATTCATGGGCGCCAGCGCTAATGCTGAACGCGTTGGACAACATCATCAACAACTTCATTGACCCTCCGCTCAAACCCTCCTTAGACCCCAGACACGTCCTGTCCCAAAACTTCGCCCCCGTCGATGAACTCCCTCCCACCGAGTGCCAAGTCGTCCAGGGCGCCCTCCCGCCATGCCTCGACGGCGCCTATATTCGAAACGGCCCAAACCCTCAGTTCCTCCCGCGTGGACCCTATCACCTCTTCGATGGCGACGGCATGTTACACGCGCTACGCATATCCCAAGGCAAACCCACTCTCTGCAGCCGCTACGTCAAAACCTACAAATACACTATGGAAAACGACGCCGGTTTTCCTCTCATCCCCAACGTCTTCTCCGGCTTCAACTCCCTCGTTGCCTCCGCGGCGCGTGGCTCTCTCTCCGCGGCGAGGGTCCTCACCGGACAGTTCAATCCCTCTAATGGCTTTGGGTTGGCCAACACCAGCTTAGCCTTCTTCGGTAACCGTCTTTTCGCGCTAGGCGAATCCGATCTCCCCTACGCTGTCAATGTTACCAGTAACGGCGACGTCGAAACAATCGGCCGTTACGACTTCAACGGCAAACTTATGCTCAGCATGACGGCGCATCCGAAGATAGACCCCGACACAGGGGAATGCTTCGCCTTCCGTTACGGTCCCATTCCCCCGTTCCTAACTTACTTCCGTTTTGACCCTAACGGGAACAAATACGACGACGTGCCTATCTTCTCCATGACTTCACCTTCGTTTCTCCACGACTTCGCCATCACCAAGAACTATGCAGTCTTCTGCGACATTCAGCTCGGAATGAATCCTCTCGACATGATCGCCGGTGGCTCCCCCGTCGGCTCCGTCGCTTCCAAGGTCCCAAGGATTGGAATCCTTCCTCGAGATGCTAAGGATGAATCCAAGATGAAGTGGTTCGACGTGCCGGGTTTTAATATAATTCACGCGATAAATGCGTGGGAGGAGGACGGGGGAAGAACGGTGGTACTGTTGGCGCCAAATATTCTGTCGGTGGAGCACGCACTGGAAAGAATGGAGCTGATTCACGCGATGGTGGAGAAGGTGAAGATCGATCTGGAGACGGGGATGGTGACGCGGCAACCGGTGTCGGCGCGGAACCTTGATTTCGCGGTTGTAAACCCGGCATTCGTTGGGAAGAAGAATAGGTTCGTTTACGCGGCGGTGGGAGACCCGATGCCGAAGATCTCGGGGGTGGTGAAGCTGGACGTGTCGAAGGCGAATGAGCGGAGGGACTGTACGGTGGGATGCAGGATGTTCGGCGAGGGGTGCTACGGCGGGGAACCTTTCTTCGTGGCGAAGGAGGAAGGGGGTGAGGAGGACGATGGGTACTTGGTGACGTACGTGCACGACGAGAGGAAGAGAGAGTCGACGTTCTTGGTGATGGACACGAAGTCGCCGGAGCTGGACGTGGTGGCGGAGGTGAAGCTTCCACGGCGGGTTCCTTACGGTTTTCATGGTTTGTTTGTGAAGGAAAGTGATCTTAGGAAAGTGGGGCCGTTGTGA 1737 0.5584 MVPKPVIVTGPPPPVSSPPNPLLKTAVSTVKTEEKPQTTTLPPPSTTTPKTTPQQRLELKRKTNSWAPALMLNALDNIINNFIDPPLKPSLDPRHVLSQNFAPVDELPPTECQVVQGALPPCLDGAYIRNGPNPQFLPRGPYHLFDGDGMLHALRISQGKPTLCSRYVKTYKYTMENDAGFPLIPNVFSGFNSLVASAARGSLSAARVLTGQFNPSNGFGLANTSLAFFGNRLFALGESDLPYAVNVTSNGDVETIGRYDFNGKLMLSMTAHPKIDPDTGECFAFRYGPIPPFLTYFRFDPNGNKYDDVPIFSMTSPSFLHDFAITKNYAVFCDIQLGMNPLDMIAGGSPVGSVASKVPRIGILPRDAKDESKMKWFDVPGFNIIHAINAWEEDGGRTVVLLAPNILSVEHALERMELIHAMVEKVKIDLETGMVTRQPVSARNLDFAVVNPAFVGKKNRFVYAAVGDPMPKISGVVKLDVSKANERRDCTVGCRMFGEGCYGGEPFFVAKEEGGEEDDGYLVTYVHDERKRESTFLVMDTKSPELDVVAEVKLPRRVPYGFHGLFVKESDLRKVGPL* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0903 578 PANTHER BETA-CAROTENE DIOXYGENASE 23 574 IPR004294 GO:0016702
Vra11g0903 578 MobiDBLite consensus disorder prediction 1 20 - -
Vra11g0903 578 MobiDBLite consensus disorder prediction 1 55 - -
Vra11g0903 578 Pfam Retinal pigment epithelial membrane protein 103 568 IPR004294 GO:0016702
Vra11g0903 578 MobiDBLite consensus disorder prediction 21 41 - -
Vra11g0903 578 PANTHER CAROTENOID CLEAVAGE DIOXYGENASE 4, CHLOROPLASTIC-RELATED 23 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0903 Vra-Chr11 7738825 7741099 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0903 K09840 - gmx:100777875 983.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0903 11 7738825 7741099 Vra11g0903 11 7738825 7741099 ECH