Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0895 ATGGAAGAGAGCAATATCCCAGTGATTGATATGGAGAAAATTGATTGTGAGGAAGGAGAGTGCAAGAAATTAAGAGAGGCATGTGAAAGATGGGGTTGTTTCAGGATCATCAACCACTCTATTTCAGAAACCCTCATGGCTGAGATGAAGAAGGTGAATCAAGCTTTGCTTGATCTTCCTCTCGAGATCAAAAAACGCAACACAGAAGTTATTGCAGGCAGTGGTTACATGGCACCAAGTGCAGTCAACCCTTTCTATGAGGCTTTAAGTCTCTATGATTTGGGTTCTTCACAAGCTATGCACAATTTCTGCTCTCAACTTCACGCTTCTCCCCAGCAGAGGAAAATCGTGGAGAGATATGGGGAGGCAATTCATGGTTTGGTAGTGAAGATAGGAGAAAAGATAGCTGAATCACTGGGCATAGTGGTTGATGATTTCAAGGATTGGCCATGCCAGTTCAGAATTAACAAATATAACTTCACCCCAGAAGCAGTAGGGTCGACTGGAGTTCAAATACACACAGATTCAGGCTTCTTAACAATTCTTCAAGATGATGAAAAAGTTGGTGGTCTTGAAGTGTTGGACTCTTCTGGTTCATTCGTGCCGGTCCCTCCTTTTCCTGGGACCCTCTTAGTCAATCTTGGAGACATTGCTCGTGTGTGGAGCAATGGAAGGTTTTGCAGTTTGATACACCGTGTCCAATGCAAGGAAGCCACCAAACGTTTTTCGATTGCTACGTTTATGTTGGCACCAAGGAATAGGAATGTTGAGGCTCCAGAGGAATTGGTGAACAAGGATCATCCTCGTTTATATCGACCTTTTATTTACGAAGATTATAGGAAGCTGAGAGTTAGCAACAAGATGCACACTGGTGAAGCCCTGGAGTTGTTGCGCTTGTCCTAG 903 0.4374 MEESNIPVIDMEKIDCEEGECKKLREACERWGCFRIINHSISETLMAEMKKVNQALLDLPLEIKKRNTEVIAGSGYMAPSAVNPFYEALSLYDLGSSQAMHNFCSQLHASPQQRKIVERYGEAIHGLVVKIGEKIAESLGIVVDDFKDWPCQFRINKYNFTPEAVGSTGVQIHTDSGFLTILQDDEKVGGLEVLDSSGSFVPVPPFPGTLLVNLGDIARVWSNGRFCSLIHRVQCKEATKRFSIATFMLAPRNRNVEAPEELVNKDHPRLYRPFIYEDYRKLRVSNKMHTGEALELLRLS* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0895 300 Pfam 2OG-Fe(II) oxygenase superfamily 152 248 IPR044861 -
Vra11g0895 300 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 147 251 IPR005123 -
Vra11g0895 300 Gene3D - 4 296 IPR027443 -
Vra11g0895 300 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 3 298 - -
Vra11g0895 300 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN 3 298 - -
Vra11g0895 300 Pfam non-haem dioxygenase in morphine synthesis N-terminal 6 77 IPR026992 -
Vra11g0895 300 SUPERFAMILY Clavaminate synthase-like 2 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0895 Vra-Chr11 7685956 7687278 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0895 6 279 Glycosyltransferase AT5G59530 27.491 2.13e-23 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0895 K23947 - gmx:100783059 530.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0895 11 7685956 7687278 Vra11g0895 11 7685956 7687278 ECH