Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0888 ATGGCGGCCACTGACGACGGATGCAAGGCGGAGAGATTTATCAGTGGGAGAGAAGAATTCGGTAACTCATCCAACACGTTCAGCGCTATTCTAGCGATGGCGCTGTGGCTGGGAGCTATTCACTTCAACATTGCCCTCATCGTCTTCGCCCTCTTCTTCCTTCCTCTCCCCAAATTACTGTTGGTTTTCGGTTTTCTGTTTGTGTTTGCAGTGCTTCCCATCGACGAGAAGAGTAGATTTGGCCGAACATTGTCGAGGTTCATTTGCAAACACGCTTGCAATTATTTTCCAATCACGCTTCACGTAGAGGATATGAACGCCTTTGATCCGAACCGTGCTTATGTTTTTGGTTATGAACCACATTCGGTTTTGCCAATTGGCATTGTGGCACTAGCTGACCACACTGGTTTCATGCCTCTTCCAAAAGTTAGAGTTCTTGCTAGCAGCACGGTGTTCTGCACACCATTTTTGAGACACATATGGACATGGTTGGGTCTTACACCAGCAACAAAGAAAAACTTTATCTCCTTGCTAGCGTCTGGCCATAGTTGCATTTTAACACCTGGTGGAGTGCAAGAGACATTCCTCATGCAACATGGCATTGAGGCACGAAGAGGATTTGTCCGCATATCAATGGTGAAAGGCCTACCTTTGGTTCCAGTTTTCTGCTTCGGTCAGTCAAATGTCTATAAGTGGTGGAAACCAGGTGGGAAGTTCTTCCTGAAAGTTGCAAGAGCTATCAAATTCACCCCAATGTGTTTTTGGGGAATTTTCGGATCTCCATTACCGTTCAGATACCCAATGCATGTGGTGGTGGGAAGACCAATTGAGCTCACCAAAAACCCCAACCCAACCACCGAGGAGGTTGCCAAGATACATAGTAAGTTTGTGGAAGCCCTTCAAGATCTCTTTGAAAGGCACAAAGCTCCTGCTGGCTATCCAAACCTTGAATTAAAAATTGTTTGA 966 0.4596 MAATDDGCKAERFISGREEFGNSSNTFSAILAMALWLGAIHFNIALIVFALFFLPLPKLLLVFGFLFVFAVLPIDEKSRFGRTLSRFICKHACNYFPITLHVEDMNAFDPNRAYVFGYEPHSVLPIGIVALADHTGFMPLPKVRVLASSTVFCTPFLRHIWTWLGLTPATKKNFISLLASGHSCILTPGGVQETFLMQHGIEARRGFVRISMVKGLPLVPVFCFGQSNVYKWWKPGGKFFLKVARAIKFTPMCFWGIFGSPLPFRYPMHVVVGRPIELTKNPNPTTEEVAKIHSKFVEALQDLFERHKAPAGYPNLELKIV* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0888 321 CDD LPLAT_MGAT-like 94 309 - -
Vra11g0888 321 Pfam Diacylglycerol acyltransferase 52 312 IPR007130 GO:0008374
Vra11g0888 321 PANTHER DIACYLGLYCEROL O-ACYLTRANSFERASE 8 321 - -
Vra11g0888 321 PANTHER TYPE 2 ACYL-COA DIACYLGLYCEROL ACYLTRANSFERASE 8 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0888 Vra-Chr11 7612090 7619986 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0888 14 321 Acyl Lipid Metabolism Gene Families AT3G51520 65.714 3.21e-156 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0888 K22848 - gmx:100784657 550.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0888 11 7612090 7619986 Vra11g0888 11 7612090 7619986 ECH
Vra11g0888 11 7612090 7619986 Vra7g0240 7 3693235 3698276 PCT