Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0882 ATGCAGATGGTCATGTTCCTTGTTCTGAAGAAAGATAAAAAAATGATATGCACCACAAGGTGCCTAGACCCGCCGATCGAATTGCCACAGGAATTGAGCTTAACTTGTGAAATTTCCAAAAATAAGATACATAGTCTTTCTGAATTTCCCCAATTTTCACTAACTCCGGTCCCAAATAATTTACGCGAGAAGTCTGAGTGGGGGAACTTTTTGAATTACCTATGTAAAAAAGACAAGGTTGCTCTTATAACCTTTAAGCAGTACCAGTTTTACATTCTACCTCCTGCATTAGTTTCAACATCAAGCCCAGTCAATGTTGCATATAATATAGATAATACAGGTTCTGTAGATACTCGTCCAAGGGATAGTGAATCAGGTTCACAGTTAGAGGAATGCGGTGGACCAAATACAGCTGAAGGTCTTAAGTTTTCTCGAGCTGAAGAAACTTGCAACGAATATCAGTCTCGAGTCCCTCTAAAAAATTTCATACGGGCAGACCCAAGTTACCTTAAAACTCTTGGCCAGGCTCATTCTGGATGGATTTTTGGTGCAATTGCTGAGCTTGTTGATAATTCCAAGGATGCCAAAGCAACTAAAATGGACATTTTTGTAGATATCATCCAGTTGAAGAAATCTCGGAAGGATGTTCCGATGCTGTGTCTTATTGATGATGGTCAAGGGATGAACCATGACGAGGTTATGAAAATGGTATCTTTTGGGCACAAGCAATCTGATAAAGTTGACACGGACCGCATTGGCAAATTTGGTGTTGGATTCAAAACAGGAGCAATGAGGCTTGGGAGAGATGTTCTGGTTCTAACACAAACAACTACTTCCAGATCTCTAGCTTTTCTTTCACAATCATTGAATGAAGGCAAAGATAATATTGAAATTCCCATAGTCAGCTATTGCCGACAAGGACAACTTATGGAAGTTGACCTAAGTATGCAGTCTGAAGCTTTGGCAAAATACAATTTGAAAGCTATTAAGGATTTTTCACCATTTAACAAGTATCTTATTGGTGAAAAGGCAGCCTTGTTTGGTACCGGTACAGGAACACAAATATACATATGGAACTTGGATGAATGGGGATCAAAGTATTGTTTAGAATGGCATGATGGACTAAAAGGTGGGAGTTCTTTTCACCAAGGTGACATTCTTATCCAAAGCAAGAGGACTCGTTCTCGTCCAGGCCAGATTAGTCAAAAGGTACCATTGGATTACTCACTACGAGCTTATTTAGAAATTATATTTTTAGTTCCTCGAATGAAGATAAGTGTACAAAGAACGTTGGTTAAAAGTCGACCATTATCAAAATTCCTTACTCAAACTGTTGTTGAAACTGGTGACATCTTGAGAAGGCCAGTTGAATTAATTCTTGGATTTAGTCAATTAGAGTGGGAGCGGGCCAACTGTGGAATGTTTTTGTATTGGCATGGTCGCCTAATTGAGGCTTACAAGAGAGTTGGTGGAATGACTCATAGTGCAGATGTTGGCCGGGGTGTAATTGGTGTTGTTGATGTGACCAATTTAATGGATGACGAGGATGGTCGGGTGTGGGTACACAATAACAAGCAGGGATTCCAAGACTCGGAACAATATGCATGTCTTGAGCAGTGGCTGAGTAGAAAAGTGGATGAATACTGGGACAACAATTTTGACGCCCTTGAGTTGAACAAAGATAATTGTGTCTTCAAACCTGATCATGAGTGGGTTCAATGTGACAAGTGCAGAAAGTGGAGAATATTACCTACAGATTTTGATAGCAGAAAATTGCCTTTGGAATGGTTTTGTTTTATGAAGCCTTTCAAAGGTCAATGTTCAGATTCCGAACAGAAGATGGCGCCGGGCATAGTTAATGTTTCCACAAAGAGGTCGGGTTATGCTTGCTTGTTGAAGGATTCCAACGATAAAAAGCTGGAAGGTGATAGGAAAACCTCTGGCGCAGATTATAAATCAATCAAATATGAGGATGCCAAAATTCCAGCATTAAAGCGGTTGAGAAAGGGGCTATGGAAACAGTAG 2025 0.4005 MQMVMFLVLKKDKKMICTTRCLDPPIELPQELSLTCEISKNKIHSLSEFPQFSLTPVPNNLREKSEWGNFLNYLCKKDKVALITFKQYQFYILPPALVSTSSPVNVAYNIDNTGSVDTRPRDSESGSQLEECGGPNTAEGLKFSRAEETCNEYQSRVPLKNFIRADPSYLKTLGQAHSGWIFGAIAELVDNSKDAKATKMDIFVDIIQLKKSRKDVPMLCLIDDGQGMNHDEVMKMVSFGHKQSDKVDTDRIGKFGVGFKTGAMRLGRDVLVLTQTTTSRSLAFLSQSLNEGKDNIEIPIVSYCRQGQLMEVDLSMQSEALAKYNLKAIKDFSPFNKYLIGEKAALFGTGTGTQIYIWNLDEWGSKYCLEWHDGLKGGSSFHQGDILIQSKRTRSRPGQISQKVPLDYSLRAYLEIIFLVPRMKISVQRTLVKSRPLSKFLTQTVVETGDILRRPVELILGFSQLEWERANCGMFLYWHGRLIEAYKRVGGMTHSADVGRGVIGVVDVTNLMDDEDGRVWVHNNKQGFQDSEQYACLEQWLSRKVDEYWDNNFDALELNKDNCVFKPDHEWVQCDKCRKWRILPTDFDSRKLPLEWFCFMKPFKGQCSDSEQKMAPGIVNVSTKRSGYACLLKDSNDKKLEGDRKTSGADYKSIKYEDAKIPALKRLRKGLWKQ* 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0882 674 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 4 671 IPR045261 GO:0016887
Vra11g0882 674 MobiDBLite consensus disorder prediction 115 135 - -
Vra11g0882 674 Gene3D - 557 615 - -
Vra11g0882 674 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 183 301 - -
Vra11g0882 674 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 172 341 IPR036890 -
Vra11g0882 674 Pfam Morc6 ribosomal protein S5 domain 2-like 408 549 IPR041006 -
Vra11g0882 674 PANTHER OS06G0622000 PROTEIN 4 671 - -
Vra11g0882 674 Pfam CW-type Zinc Finger 570 612 IPR011124 GO:0008270
Vra11g0882 674 Gene3D - 151 333 IPR036890 -
Vra11g0882 674 ProSiteProfiles Zinc finger CW-type profile. 565 615 IPR011124 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0882 Vra-Chr11 7491289 7515416 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0882 - - vra:106777695 1092.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0882 11 7491289 7515416 Vra11g0882 11 7491289 7515416 ECH