Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0845 ATGATGGACACTCACGCGGAAGGTTCTGTTAGACCTGAGGAGCATTTTCCTGATGAGGATCATCATTACGAAGATGGAAGCAATGGAAATATTGTATTGGAAAATGGATTGTCCGATGGTAATCAAGGTCCTGCTGATACTGACGATCAGCTTCTAGAAATGGTTATGGACCTCAGGTTTCAGAATGACTACTTAAAGTCCCAGTTTGAGGGATTGAAAATTGTAAACAGTGTACATAGTGGTTCTAGTATACAGAAAGGAGTTGGTGGCTTAGAAGATGGGGATTCTGACATTGTGAAAGAACTAAAGGAAAAAATACTATTGTTGAATAAAGAATTTCTGGAAGAAAAGCAAACAAGAATTGCATCAGAGGAGGCTTTGAAGCATCTTCAAGTGGCATACTCAGAGGCAGAAGCAAAGGGCCAGGAGCTCTCTGAAAAGCTTGCAGAAGCTCAAACAAAGTTGGACCAAGAAATAAAAGAGCGTGATGAGAAGTATTCTGAACTTGACTCCAAGTTTAACAGGCTTCACAAGCGAGCAAAACAGCGTATTCAAGAAATTCAAAAGGAAAAAGATGATATTGAGGCCCGTTTCTCTGAGGTGAATGAAATTGCAGAGCGTGCATCATCCCAACAGTTAGCAATGCAACAAGAATTAGAGCGTACCAGGAAGCAAGCAAATGAGGCATTGAAAGCCATGGATGGTGATAGACAACAACTAAGAAGTGCAAACAACAATCTTCGAGATACCATTGAAGATTTAAAGCGTTCATTGCAACCTAAAGAGAGTGCTCTTGAAGCATTGCAACAATCACTTGCAGAAAAGGAACAGATGTTGGAGGATATGAGAGGGTTGCTTCAGGCTGCTGAAGAAAAAAGGCAAGCTGCACTAGTTGAGCTCTCTTCTAAGCACCAAAAGAATATAGAGAGTTTGGAGGCTCAACTTAATGATGCATTGTCTGACAGAAGTAAGGCAGCTGAGTCTATTTCTTCACTGCAGGTTCTAGTTGCAGAAAAAGAATCCAGAATTGCAGAGATGGAAGCAGCATCAACCGGGGAAGCAGCACGACTCAGAGCGGTGGTGGAAAGTGTGAAAGGGGAGCTTTCTCACCTAAAAGAGGAGCATGAAAAAGAAAGGGAAAGCTGGGAGACTGCTTCGCAAGCCCTCAAAGCAAAACTCGAGATTGCAGAGAGCAACTGCATACATGCAGAAGTTGAAGTAGCCAAAATAAGAAGTCAGCTAGAATCAGAAGTATCTGCCCAAACAAGGATCCTCAATATGAGAGATGTGGAATTGTTGGCTGCTAAAGAAGAGATCCGGTCTCTAGAAAAGGAATTTTCTTCATACAAAGTTCGTGCACATGCACTTCTTCAAAAGAAAGATGCTGAACTGGCGGCTGCTAAAGATTCTGAACAACTCAGAGCTCTAGAGGAAACTCTGAAAGAGGTTGAAAATGAAGTCTTATCAATAACAGAAGAAAGGGATAAAGTTCTTCAAGATCTTCAATCTGCTATGGCTAATCATGAGAAGGAACTTGCAGAAAGAGACACAACCCTTGAAAATGTCAAGCAACAGATAAGGAGCTTGGAAATAAAGCTTGACTCAGTTAATGCTCAGCACCTAAAAGAGAAAGAGGAATGGGGACTAAGTCTTCAAAATGTAGAAGAAACATGGAGAATCAAATGTGAGGCAATTAAGGCTGAAAATGAAGCAACTGCCACAAAAGATAAGCAAAAGGAATTGGAAGAGCTCAAACAACGATTTAAAAAACTGAAGGAAGAGCACACTTCATTTCATGATCTTGCTGATAGGACGATTGAGGAGAAAGATTATGAAATATCCAGACTTTTAGATGAAAATAAAAACCTTCGCCAGTCTCTTCAATCAAGACCACTAGTCGATCAAAATGATTCTTACACAACAGCCTCACATAAATTGGATTCAACAAATTTAAGCCCCTCTGCCGCAGAACAGCAAATTCTGCTTTTGGCTAGACAACAAGCGCAAAGAGAGGAGGAGTTAGCACAGTCACAGCGTCATATTTTAGCTCTTCAAGAAGAAATTGAAGAGCTTGAACATGAGAATCGTCTCCACAACCAACAGGAGGCAATGTTAAAGACTGAGCTTCGCAACATGGAAAGATCGAAGAAAAGGGAAGGTGTAGATATGACATATTTGAAGAATGTTATATTAAAGCTACTTGAAACTGGTGAAGTTGAGGTATTGCTTCCGGTTATTGGAATGCTGCTTCAGTTTAGTCCAGAAGAGATGCAGAAGTGTCAACAGGCATATCACACCTCAACAGAAGTTCCACCAACTCCTGCAAGTGATACTTCAGGATCTGGCCTATCACTTTTCTCAAGATTCACATTTTCTTAA 2379 0.4082 MMDTHAEGSVRPEEHFPDEDHHYEDGSNGNIVLENGLSDGNQGPADTDDQLLEMVMDLRFQNDYLKSQFEGLKIVNSVHSGSSIQKGVGGLEDGDSDIVKELKEKILLLNKEFLEEKQTRIASEEALKHLQVAYSEAEAKGQELSEKLAEAQTKLDQEIKERDEKYSELDSKFNRLHKRAKQRIQEIQKEKDDIEARFSEVNEIAERASSQQLAMQQELERTRKQANEALKAMDGDRQQLRSANNNLRDTIEDLKRSLQPKESALEALQQSLAEKEQMLEDMRGLLQAAEEKRQAALVELSSKHQKNIESLEAQLNDALSDRSKAAESISSLQVLVAEKESRIAEMEAASTGEAARLRAVVESVKGELSHLKEEHEKERESWETASQALKAKLEIAESNCIHAEVEVAKIRSQLESEVSAQTRILNMRDVELLAAKEEIRSLEKEFSSYKVRAHALLQKKDAELAAAKDSEQLRALEETLKEVENEVLSITEERDKVLQDLQSAMANHEKELAERDTTLENVKQQIRSLEIKLDSVNAQHLKEKEEWGLSLQNVEETWRIKCEAIKAENEATATKDKQKELEELKQRFKKLKEEHTSFHDLADRTIEEKDYEISRLLDENKNLRQSLQSRPLVDQNDSYTTASHKLDSTNLSPSAAEQQILLLARQQAQREEELAQSQRHILALQEEIEELEHENRLHNQQEAMLKTELRNMERSKKREGVDMTYLKNVILKLLETGEVEVLLPVIGMLLQFSPEEMQKCQQAYHTSTEVPPTPASDTSGSGLSLFSRFTFS* 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0845 792 Coils Coil 177 349 - -
Vra11g0845 792 Coils Coil 667 708 - -
Vra11g0845 792 MobiDBLite consensus disorder prediction 1 47 - -
Vra11g0845 792 Coils Coil 459 546 - -
Vra11g0845 792 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 40 768 - -
Vra11g0845 792 Coils Coil 354 399 - -
Vra11g0845 792 Pfam GRIP domain 720 759 IPR000237 -
Vra11g0845 792 SMART 1grip 719 763 IPR000237 -
Vra11g0845 792 Coils Coil 564 601 - -
Vra11g0845 792 Coils Coil 425 452 - -
Vra11g0845 792 Coils Coil 99 119 - -
Vra11g0845 792 Coils Coil 606 626 - -
Vra11g0845 792 MobiDBLite consensus disorder prediction 31 45 - -
Vra11g0845 792 ProSiteProfiles GRIP domain profile. 716 763 IPR000237 -
Vra11g0845 792 PANTHER CROSSOVER SUPPRESSOR ON 3 OF GOWEN 40 768 - -
Vra11g0845 792 MobiDBLite consensus disorder prediction 1 27 - -
Vra11g0845 792 Coils Coil 127 168 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0845 - - gmx:100775990 1285.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0845 11 7060379 7073818 Vra11g0845 11 7060379 7073818 ECH