Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0841 ATGAGTGAAGAAGACTTGGTTGAGTGCTCTTTGAGAAACACGATGCCATTGTCACCTATCACTTTCTTGGAACAAGCTTCCACTGTCTATGGAGACAACCTCTCCATCATCTTCGATCATACTGTCAGCTTTTCTTGGAGACAAACCTATCACAGATGCCTCAAACTTGCTTCTGCTTTGGTTAACCTAGGACTTTCTCACAACGATAATGTTGCAGCTTTGGCACCAAATATTCCAGCACTGTACGAGCTTCATTTTGGTGTTCCCATGGCAGGGGGTGTTCTTTCTGCACTGAATACTCAATTGGATGTGGCAGTGTTGGCTCTGATATTGGAACAATTAGAGCCATGCAAAATCATGTTTGTGGACTACCAGTTAATTGATTCTGCCCTCAAGGCGTTTGAAATTCTCTCCCAGAGAAAATGCAAGCCACCCCATATTGTTCTAATGCCATGTTATGACCAAGAACCATCTTTCTCAGTTAAGGATATCCCCCCATGTACCTTGAACTACAATGAGCTTCTTGCAACTGGACAAAATGATTTTGAGCCTTTAAAACCAAGCAATGAATGCAATCCCATATCAGTGAACTACACCTCAGGCACCACAGGGATTCTTCCAAAAGGGGTTGTTTATAGCCATAAAGGTACTTGTCTTAATTCACTTGCAGCAATTGCTCGTTTTGAGATGAAACAAATGGCAGTGTTTCTATGGACAGTTGACATGTTTCGTTGCAATGGATGGTGCTTTCCATGGGTCATGCCTCTTATTGGTGGCACCAATATTTGCCTAAGGAATGTCTCAGCAAAAGGTATATTTGATGCAATTCACCGTTACAAGGTAACTCATTTTTGTGGTGCACCTACCCTTTTGGACATGATTGCAAATGCATCACCAACTGACCACAGGCCTCTGCCTCATAGGGTGAATGTCACAGTTGCTGGTGTGCTGCCACCTACCCATGTTCTTAACAAGGTATCAGAGCTTGGATTTGATGTGAACATAGGATATGGTATGACAGAAACTTATGGTCCTTTCATTATAAGACCGTGGAACCCCACTTCAGATGATGAACATACAAAGCTGAATTATGGTATGTCAGAGGTTATGCAGAATGTTGATGTGAAGGATCCAAAGACTAATGAAAGTACTCCTCCTGATGGTAAAACCATAGGTGAAATTGTGTTCAAAGGGGAAGCTTTGATGATGGGGTACCTTAAAAATCCACAAGCAACTGAAGAGGCTATTAGGGGTGGATGGTATATGACTGGGGACCTTGGTGTTAGACAACCAAATGGTTCTATAACAATGAAGGATAGAGCAAAGGATATGATGTATTGTGAGGGAGAAGCTGTGAGCTCACTAGAGGTGGAAGCAGTGCTGTTGAATCATCCAAAGGTTTTGAAAGCTGCTGTTGTGGGGAGATGTGATGAATATTTGGTGGAAACACCATTTGCAATTGTTGAATTGAGAGAGGGATGCAGTGCCACTGTTGAAGAAATCATCAAGTTCTGTGAAGATAATTTGGCTAGTCATATGGTCCCTAGGTGTGTGCTATTTGGAGATTTACCTGTTAATTCAACTGGGAAGGTTCAGAAATTTCGCATCAGGGAGAAGATCAAAACCGAGAGTGGTGTTACTCAATGA 1647 0.4226 MSEEDLVECSLRNTMPLSPITFLEQASTVYGDNLSIIFDHTVSFSWRQTYHRCLKLASALVNLGLSHNDNVAALAPNIPALYELHFGVPMAGGVLSALNTQLDVAVLALILEQLEPCKIMFVDYQLIDSALKAFEILSQRKCKPPHIVLMPCYDQEPSFSVKDIPPCTLNYNELLATGQNDFEPLKPSNECNPISVNYTSGTTGILPKGVVYSHKGTCLNSLAAIARFEMKQMAVFLWTVDMFRCNGWCFPWVMPLIGGTNICLRNVSAKGIFDAIHRYKVTHFCGAPTLLDMIANASPTDHRPLPHRVNVTVAGVLPPTHVLNKVSELGFDVNIGYGMTETYGPFIIRPWNPTSDDEHTKLNYGMSEVMQNVDVKDPKTNESTPPDGKTIGEIVFKGEALMMGYLKNPQATEEAIRGGWYMTGDLGVRQPNGSITMKDRAKDMMYCEGEAVSSLEVEAVLLNHPKVLKAAVVGRCDEYLVETPFAIVELREGCSATVEEIIKFCEDNLASHMVPRCVLFGDLPVNSTGKVQKFRIREKIKTESGVTQ* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0841 548 PANTHER FATTY ACYL-COA SYNTHETASE FAMILY PROTEIN 25 542 - -
Vra11g0841 548 SUPERFAMILY Acetyl-CoA synthetase-like 14 542 - -
Vra11g0841 548 Pfam AMP-binding enzyme 24 445 IPR000873 -
Vra11g0841 548 Pfam AMP-binding enzyme C-terminal domain 456 530 IPR025110 -
Vra11g0841 548 PANTHER ACYL-ACTIVATING ENZYME 25 542 - -
Vra11g0841 548 Gene3D - 7 441 IPR042099 -
Vra11g0841 548 Gene3D - 442 545 IPR045851 -
Vra11g0841 548 CDD ttLC_FACS_AEE21_like 16 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0841 Vra-Chr11 7010663 7017387 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0841 81 541 Miscellaneous Gene Families AT1G20560 49.469 2.99e-157 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0841 - - gmx:100819291 888.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0841 11 7010663 7017387 Vra11g0841 11 7010663 7017387 ECH