Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0797 ATGGCTTCAGCAGCCACCAATTTCTCTCTTTCTCTCCGCACCAAACAGCAAATTCCAATCTCTAAACCCTCTTTCTTCTTCTATTCCACCAGCAAGAACAACCATTTGCGCTTCAAATCTAATAATTTTCCTTCACACTCTGTTTCCACCGCTCGCTACTCAAGGATATGCGCCACCTCGTCTCGAGTCATGGATCCCTCCGCTGCCAAATCCGAATCCACCCTTCCCACCACCGTCGAAGTTGATTTGGGTAATCGGAGCTATCCCATTTACATCGGGTCCGGGTTACTAGACCAACCCGACTATCTTCAGAGGCATGTGCATGGAAAGAGGGTCCTAGTTGTAACCAACAAAACGGTTGCACCACTTTATCTAGACAAGGTTGTTGATGCTTTGACAAGGGGAAACCCAAATGTTTCTGTGGAGAGTGTAATTTTACCTGATGGTGAGCAGTACAAGGACATGGATACTCTTATGAAAGTCTTTGACAAGGCCATTGAGTCACGACTTGACCGACGGTGTACATTTGTTGCCCTTGGTGGTGGTGTTATTGGTGATATGTGTGGCTTTGCTGCCTCTGCATTCCTACGTGGTGTTAATTTTATTCAGATTCCTACCACAGTGATGGCACAGGTTGATTCTTCAGTTGGTGGCAAAACTGGGATAAATCATCGCCTTGGAAAGAATCTGATCGGTGCTTTTTACCAACCTCAGTGTGTGCTTATAGACACAGACACCTTGAATACATTACCAGATAGGGAACTGGCATCAGGGCTTGCTGAGGTCATAAAGTATGGCCTCATTAGGGATGCAGAGTTTTTTGAGTGGCAAGAGAAAAATATGCAGGCATTACTGGCTAGAGATCCTAGTGCATTGGCATATGCTATAAAGCGATCTTGTGAAAACAAGGCTGAGGTTGTGTCCTTGGATGAGAAGGAAAGTGGACTGAGGGCAACATTGAACTTGGGTCATACATTTGGTCATGCTATAGAAAATGGGGTTGGCTATGGGCAGTGGCTTCATGGAGAGGCTGTTGCAGCCGGCACGGTAATGGCTGTTGACATGTCATATCGCCTTGGTTGGATTGATGAACCTCTTGTAAAACGAGTTGGAGACATTTTAAAACAGTCTAAGTTACCCACGGCCCCTCCTGAGATAATGACTGTGGACATGTTTAAATCTGTCATGGCGGTTGATAAGAAGGTAGCAGATGGGTTGCTCAGGCTTATTCTTCTAAAGGGTCCTCTTGGCAATTGTGTATTCACAGGGGATTATGACAGAAAGGCCCTAGATGATACGCTTCGAGCATTCTGTAAATCCTGA 1323 0.4558 MASAATNFSLSLRTKQQIPISKPSFFFYSTSKNNHLRFKSNNFPSHSVSTARYSRICATSSRVMDPSAAKSESTLPTTVEVDLGNRSYPIYIGSGLLDQPDYLQRHVHGKRVLVVTNKTVAPLYLDKVVDALTRGNPNVSVESVILPDGEQYKDMDTLMKVFDKAIESRLDRRCTFVALGGGVIGDMCGFAASAFLRGVNFIQIPTTVMAQVDSSVGGKTGINHRLGKNLIGAFYQPQCVLIDTDTLNTLPDRELASGLAEVIKYGLIRDAEFFEWQEKNMQALLARDPSALAYAIKRSCENKAEVVSLDEKESGLRATLNLGHTFGHAIENGVGYGQWLHGEAVAAGTVMAVDMSYRLGWIDEPLVKRVGDILKQSKLPTAPPEIMTVDMFKSVMAVDKKVADGLLRLILLKGPLGNCVFTGDYDRKALDDTLRAFCKS* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0797 440 Hamap 3-dehydroquinate synthase [aroB]. 76 438 IPR016037 GO:0003856|GO:0005737|GO:0009073
Vra11g0797 440 Gene3D - 63 249 - -
Vra11g0797 440 PANTHER 3-DEHYDROQUINATE SYNTHASE 76 436 - -
Vra11g0797 440 Pfam 3-dehydroquinate synthase 144 402 IPR030960 -
Vra11g0797 440 SUPERFAMILY Dehydroquinate synthase-like 79 433 - -
Vra11g0797 440 PANTHER 3-DEHYDROQUINATE SYNTHASE, CHLOROPLASTIC 76 436 - -
Vra11g0797 440 CDD DHQS 87 434 - -
Vra11g0797 440 Gene3D - 250 440 - -
Vra11g0797 440 TIGRFAM aroB: 3-dehydroquinate synthase 88 428 IPR016037 GO:0003856|GO:0005737|GO:0009073
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0797 K01735 - gmx:100806628 783.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0797 11 6561499 6567069 Vra11g0797 11 6561499 6567069 ECH