Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0795 ATGGGTTGCTGCCAGTCGAGGATAGAGAGGGAAGAAACGGTGTCGCGTTGCAAATCCAGGAAGCGTTACATGAAGCAGTTCGTGCAAGCCAGACATGCTTTTTCTGCGGCACATGCTATGTACATTCGTTCGCTTCGTGCCACTGGTTCAGCACTCTTTCAGTTCGCAAATGCTGAAACCACGGTTCTCCACCACCTCAACCATCACCATCACCACCTTCCGCCGCGCCCTCAGCCCATTCTCCCGCCGCCGCCTCCGCGAACTCCCACCCCGATGCCGCCGCCACCTCCTCCGCCGCCGATGAGTCTGAGCTCTTACACTTGGACTTCGGACTCTACCTCCTCCCCGGCTCTTCCCCCGCCGCCTCCACCGCCTCCCCCGGTGCCTTCCTCCGCCTGGGACTTCTGGGACCCGTTTATGCCGGCTGCGCCGGCGATGGCTTCCCGGTCGGTGACGGAGGAGGAGTGGGAGGCTACAACAACCACCGGATCAGAAGTGGTAGTGATGGCGGCGGCGAGTGTGACGGCTCCACCGTCAGTGGTGAGCGGGTTTTCCAAGGAGACACCTAGTGAGCTTGCAATGGTTGTTTCAAGGAATAGTACCAAGGATCTTGTTGAAGTTATCAAAGAGCTCGATGATTATTTTCTCAAAGCTGCTGATGCTGGTTCTCATGTTTCTTTGATCCTTGAAGTTTCAAACTCTGGATTTTCTGATAACAGTAAAGCGTGTAAAGTGCACAGCTATGGGTGGAATTTGAGTCCGTCCTTGTGGACTTGGGGTTCGAGTCCGAAGCTGAATGGGTTTGGAAAACTGACTGAGGGAACTCCCGTTTCTGTTGGTACTTTTGGGGCTAATGGAGGTGGAAGTGTTGGGCACGGGTCCACTGTGGAGAGGCTATACGCATGGGAGAAGAAGTTGTATCAAGAGGTCAAGAATGCTAAGACTATAAAGATGGAGCATGAGAAGAAGCTGGCACTGCTAAGGAAGGTGGAGATGAAGAGAGCTGACTATGTGAAGGCAGAGAAGACAAAGAAAGAAGTGGAGAAGTTAGAATCACAAATGATGGTGGCTTCTCAAGCCATTGATAGTACATCTGCTGAAATAATCAAACTGAGGGAGGTGGAGCTGTACCCTCAACTCATTGAGCTTGTCAAAGGATTAATGTGCATGTGGAGAAGCATGTACGAGTGTCATCAAGTTCAAAAGCACATAGTTCAGCAGCTAGAGTACCTCAACACCGTACCATCAAACAACCCCACTTCTGAGATTCACAGGCAATCAACTCTTCAGCTGGAGCTTGAAGTACAGCAATGGCACCAATCTTTCTGCAATCTCTTCAAGGCTCACCGCGATTACATCCAATCCCTCACAGGTTGGCTAAGGCTCACCCTTTTCCAGTTCAGCAAAAACCCTCTAAGCAGAACCCCGGAGGAGTCAAAGATATACTCCCTCTGTGAAGAATGGCACCTTGCTGTTGATCGCATCCCAGACAATGTAGCATCCGAAGGAATAAAAAGCTTGTTAACGGTTATTCATGCCATAGTAGAGCAACAGGCAGAGGAGTATAAACAAAAGAAGAAGTCAGATTGTGCGTTCAAAGAGCTTGAGAAGAAGGTGGTTCAGCTTCGGTCTTTGGAGTGCAAGTATGGTCCATACTCCATGCCAGAATCCTCTGGTTCCATGCGAAACAAGGACTCGGTGAGCGAGAAGCGTGCCAAGGTGGAAGCTTTGAGAGCAAAGGCAGAAGAAGAGAAGAACAAATACGAGAAGGCAGTGAGTGTAACTAGGGCAATGACGCTGAACAACTTGCAAATGGGTTGCCCGCATGTGTTTCAAGGGATTGTGGGGTTTTCAAGTGTGTGCATGGAGGTTTTTGAGTCTGTATACAACAAAGCCAAAGTTGCTGAACAGGAGCATGACGTGAAGAGAATATTGCCGTAG 1941 0.5018 MGCCQSRIEREETVSRCKSRKRYMKQFVQARHAFSAAHAMYIRSLRATGSALFQFANAETTVLHHLNHHHHHLPPRPQPILPPPPPRTPTPMPPPPPPPPMSLSSYTWTSDSTSSPALPPPPPPPPPVPSSAWDFWDPFMPAAPAMASRSVTEEEWEATTTTGSEVVVMAAASVTAPPSVVSGFSKETPSELAMVVSRNSTKDLVEVIKELDDYFLKAADAGSHVSLILEVSNSGFSDNSKACKVHSYGWNLSPSLWTWGSSPKLNGFGKLTEGTPVSVGTFGANGGGSVGHGSTVERLYAWEKKLYQEVKNAKTIKMEHEKKLALLRKVEMKRADYVKAEKTKKEVEKLESQMMVASQAIDSTSAEIIKLREVELYPQLIELVKGLMCMWRSMYECHQVQKHIVQQLEYLNTVPSNNPTSEIHRQSTLQLELEVQQWHQSFCNLFKAHRDYIQSLTGWLRLTLFQFSKNPLSRTPEESKIYSLCEEWHLAVDRIPDNVASEGIKSLLTVIHAIVEQQAEEYKQKKKSDCAFKELEKKVVQLRSLECKYGPYSMPESSGSMRNKDSVSEKRAKVEALRAKAEEEKNKYEKAVSVTRAMTLNNLQMGCPHVFQGIVGFSSVCMEVFESVYNKAKVAEQEHDVKRILP* 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0795 646 Coils Coil 340 367 - -
Vra11g0795 646 PANTHER SERINE HYDROXYMETHYLTRANSFERASE, PUTATIVE (DUF632)-RELATED 1 631 - -
Vra11g0795 646 Pfam Protein of unknown function (DUF632) 204 512 IPR006867 -
Vra11g0795 646 Coils Coil 564 598 - -
Vra11g0795 646 MobiDBLite consensus disorder prediction 66 131 - -
Vra11g0795 646 PANTHER UNCHARACTERIZED 1 631 - -
Vra11g0795 646 MobiDBLite consensus disorder prediction 76 103 - -
Vra11g0795 646 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Vra11g0795 646 MobiDBLite consensus disorder prediction 115 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0795 Vra-Chr11 6552849 6556663 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0795 1 62 Acyl Lipid Metabolism Gene Families AT2G27090 37.097 1.06e-08 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0795 - - gmx:100808077 1048.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0795 11 6552849 6556663 Vra11g0795 11 6552849 6556663 ECH