Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0791 ATGGCTTATCAAAACCCTAATCAAAGAAATTCTCTCTATCCTCAGGTAATCGATTCTAACCCCGATGCTCCCTCGCCTCTCCACAATACCAATCCCTCATCCTCTTCGCAAACCACACTTTACCCCTCCATTGACTACAACGACCTCGTTCAAAATCTCTTTCCCGAGGATGCCTCCGCTGCTGGCTCCCCCTCCGCGCCGCTTGAGGCCACCGAGGAGGTCCTCCTCCGCATCCCCGGCGCGATCCTCAACCTCGTCGATAAGGACTACAGCGTCGAGCTTGCGTGCGGTGACTTTTCCGTCATCCGCCTCCGGCAGGGAGATAACGCCGTCGCCGTGTACGCGCGCGTCGCCGAAGAGATCCAATGGCCACTGGCGAAGGATGCGACCGCCGTGAAAGTCGACGATTCGCACTACTTCTTCTCGTTCCGCGTCCCCAAGGGCTCCGATCCCGGGGAGGAGGAAGAGGATGTTCTTAGCTACGGGTTAACGATCGCGTCGAAGGGGCAGAAGGAGCTTCTGAAGGAGCTTGACGCGGTTTTGGAGAGCTGTAGCTGCTTCTCCGTGCAGAGTGTTTCGGAGAATGCGAAGAAGAAAGGGGAGGCTCTGGATGGGAGCGTGGCGAAAGAAGTTTCGCCGAAAGATTTGAAGTCGGGGAAGAAGAAGGAGATGATGGAGGAGCGGTGCGCTGCGTACTGGACGACATTAGCGCCCAATGTGGAGGATTATAGTGGAACTGCTGCGAGGATGATCGCTGCAGGATCTGGACATGTGGTTAAGGGGATCTTGTGGTGTGGGGATGTGACCATGGACAGGTTGGAATGGGGGAATAAGGTTATGAAAAAGAAGATCACTCCTGGTTCCAATGCTGAGGTTAGTCCTCAGACCTTGAAGCGGATTAAGAGGGTTAAGAGAGTTACTAAAATGACAGAAAAAGTAGCAAATGGTTTCCTCTCCGGGGTCGTGAAAGTGTCTGGATTTTTCACCGGTTCAGTGGTAAACTCAAAAGCTGGAAAGAAATTTTTCAGCTTTCTACCGGGGGAAGTTTTACTTGCATCGTTGGATGGATTCAGTAAAGTGTGTGATGCTGTTGAAGTGGCTGGAAAGAATGTTATGTCAACGTCATCGACTGTGACAACAGAGCTTGTGAATCACAGGTATGGAGAACAAGCAGCTGAAGCGACGAGTGAAGGCTTTACTGCTGCTGGCCATGCTTTGGGTACTGCCTGGGCTGCCTTTAAGATCAGGAAGGCTATCAACCCTAAGAGTGTTCTTAAACCTACAACCATCGCCAAAGCTGGTGCTAAAGCTGCAGCTTCTGAATTTAAGGCTAAAAGTTCCAAGTAA 1347 0.5167 MAYQNPNQRNSLYPQVIDSNPDAPSPLHNTNPSSSSQTTLYPSIDYNDLVQNLFPEDASAAGSPSAPLEATEEVLLRIPGAILNLVDKDYSVELACGDFSVIRLRQGDNAVAVYARVAEEIQWPLAKDATAVKVDDSHYFFSFRVPKGSDPGEEEEDVLSYGLTIASKGQKELLKELDAVLESCSCFSVQSVSENAKKKGEALDGSVAKEVSPKDLKSGKKKEMMEERCAAYWTTLAPNVEDYSGTAARMIAAGSGHVVKGILWCGDVTMDRLEWGNKVMKKKITPGSNAEVSPQTLKRIKRVKRVTKMTEKVANGFLSGVVKVSGFFTGSVVNSKAGKKFFSFLPGEVLLASLDGFSKVCDAVEVAGKNVMSTSSTVTTELVNHRYGEQAAEATSEGFTAAGHALGTAWAAFKIRKAINPKSVLKPTTIAKAGAKAAASEFKAKSSK* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0791 448 Pfam Senescence domain 250 435 IPR009686 -
Vra11g0791 448 PANTHER SENESCENCE/DEHYDRATION-ASSOCIATED-LIKE PROTEIN 1 149 - -
Vra11g0791 448 PANTHER SENESCENCE/DEHYDRATION-ASSOCIATED-LIKE PROTEIN 154 448 - -
Vra11g0791 448 MobiDBLite consensus disorder prediction 1 41 - -
Vra11g0791 448 PANTHER SPARTIN 154 448 IPR045036 -
Vra11g0791 448 PANTHER SPARTIN 1 149 IPR045036 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0791 Vra-Chr11 6512055 6517343 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0791 K19366 - gmx:100804971 783.097
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0791 11 6512055 6517343 Vra11g0791 11 6512055 6517343 ECH
Vra11g0791 11 6512055 6517343 Vra7g0151 7 2496038 2498764 PCT