Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0768 ATGGATCGCCGGGGTTGGCTCTGGAAGAAAAAATCATCTGATAAAAGCATAAAGATTGAGGATGAGAAACCTGTCTCTTATGAATCTGTTGTTCCAACCTTGTCTTCTGTTGCACGTGTAGATAAGCAAGACAACAGCAAAAACAAGAACTATGTTCAGATATCCATGGAGTCGTATACTCATATGTCTGGATTGGAAGATCAAGTTGTAAACTTGGAGGATCAACTAAAAGCTTTGGAAGCAAAGCTATCTTCAGTTCATACGGAATTAAATAACAAGGATAATCTAGTTAAACAGCATGCAAAAGTTGCAGAGGAAGCAGTATCAGGTTGGGAGAAAGCTGATGCAGAAGTTGTTTCCCTAAGATGTCAACTTGAATCGGTATCTCTCTCTAAGCTTACCGTCGATGAGAAAGCAGCTCACCTAGATGACGCCCTAAAAGAGTGCATGAAGCAGATAAGAATTGTAAAGGAAGAAAGTGAGCATAAATTGCAGGAAGTGATTCTTATGAAATCTCATCAATGGGAGAAAAGCAAGTTAGAACTTGAAGCTCAAATAGACAATTTGGATGAAGGACTACGTGAGTTAGCCAGTGAAAATGCTGCCCTTCTAAGATCACTTCAAGAAAGTTCAAACAAAATAGTGAAACTAAAAGAAGAAAAGTCTGAAGCCGAGGGAGAGGTTGAGCTTCTAACGAAGAGTGTTCAGTCAAAAGAGAAAGAAATATCTTCTTTGAAGTATGAGGTGCATGTAATTTCTAAGGAGCTAGATATCCGAAACGAAGAGAAGAATATGATTATGAGGTCTGCTGAAGTGGCAAACAAGCAGCACACGGAGGATGTCAAGAACATTGCCAAGCTAGAGAATGAGTGCCAACGACTTCGTGGTCTGTTGAGAAAGAAGTTACCTGGGGCTGCTGCGTTGGCACAAATGAAGCTAGAAGTTGAGAGTTCACATCATGTCATCGGTGCATCCCATCTAAGAAAAACTACTTCAAAAAGTGATAACCTGCAAGAATCTGAGTTTCTTTCCAAAAAATTACAGGTTTTGGAAGAAGAAACAAGGACATTGAAAGAAGCATTGGCCTCAAGTAATGCTGAACTGCAGGCTTCTAAAAACTTGTATGCTAAAACAGTTGGCAGACTTAAGCGCTTGGAAGCAGAGAGGCATCAAGAAAGAAGCACCCAGAAAGCAATTTTGGCAAACAATTATGAAAACTCCTTTATAAGAATTTACAGCTACTCACCGAGCATTACTTCTATCTCTGATAATGGACATGAGGATCCAGAAAGTCCTGTTGAGTCCTGTGCGACATCAATTCTTGACCAGTCTGATATAAATAGAATTGGAAGTGTAGGTAAATTTGAGAATCATAGGAGTGAAACTGTCTCAGAACTGATGGATGACTTTTTGGAAGTGGAGAAGATGGCATGTTTATCAGACAATGGTGGTGTACCTCTTGGCATCATTAGTAAAACTAGAGATACAGCCGAAGACAAAAAGGAGACTGGTTGTTTATCTTCAAATCAAAATTGTTTTGACACGACGAACCAAACTGAAAGTAATAACCCCGATAAGGCAGCTGAACATGATGTGCATATGCAAGATCTTGAAGAACAAAAGCTGATGTTACAGGAAAACATGCAACTTCTAGAAGAACTGAAAGCACAATTGGCGTCGTCCCACAAATCATGTAGTTTAACTGAAATTCAGCTGAAATGTATGACTGAGTCTTACAAGTCGCTTCAAACTCGTGTAGAGGAGTTAGAAACTGAAAATAAGAATTTAAAGGAAAAGATGGATGAGCTAAAGAATGATCTTACAGAGGAAAAACAAAGTCATCACGATGCTTTGGTGAGATACAAAGAAATTGAGGAGAAAATGCAAAGGGACACGTGCTCGGTGTGTGCATCGAATTCAACAGCAAACTCCGGGAAGGATAAAGAGCTAGCAGCTGCAGAGAAAAGGCTGGCAGAATGCCAGGAGACTCTTTCTATACTTGGTAGACAGTTGCAAGCCATGTGCCCCCAGATAGGTGTAACCACGACCCATCATAGTAAAAGGCTTCAAGTGAATGAAAAGTTAGCCAAACCATCTTATGGCTGGTCTAATTCTTACGGATCCTGTAACTCAAATGAAATTGAGCATGCTGAGGCATGTAGCGTTGTGGCTGATGAGTTTTCATCTCATAACTCTGGTGCCACATCATGCCTTTCAGACACCGAAGGCAACTTTTGGTTAAACTCTTAA 2250 0.4018 MDRRGWLWKKKSSDKSIKIEDEKPVSYESVVPTLSSVARVDKQDNSKNKNYVQISMESYTHMSGLEDQVVNLEDQLKALEAKLSSVHTELNNKDNLVKQHAKVAEEAVSGWEKADAEVVSLRCQLESVSLSKLTVDEKAAHLDDALKECMKQIRIVKEESEHKLQEVILMKSHQWEKSKLELEAQIDNLDEGLRELASENAALLRSLQESSNKIVKLKEEKSEAEGEVELLTKSVQSKEKEISSLKYEVHVISKELDIRNEEKNMIMRSAEVANKQHTEDVKNIAKLENECQRLRGLLRKKLPGAAALAQMKLEVESSHHVIGASHLRKTTSKSDNLQESEFLSKKLQVLEEETRTLKEALASSNAELQASKNLYAKTVGRLKRLEAERHQERSTQKAILANNYENSFIRIYSYSPSITSISDNGHEDPESPVESCATSILDQSDINRIGSVGKFENHRSETVSELMDDFLEVEKMACLSDNGGVPLGIISKTRDTAEDKKETGCLSSNQNCFDTTNQTESNNPDKAAEHDVHMQDLEEQKLMLQENMQLLEELKAQLASSHKSCSLTEIQLKCMTESYKSLQTRVEELETENKNLKEKMDELKNDLTEEKQSHHDALVRYKEIEEKMQRDTCSVCASNSTANSGKDKELAAAEKRLAECQETLSILGRQLQAMCPQIGVTTTHHSKRLQVNEKLAKPSYGWSNSYGSCNSNEIEHAEACSVVADEFSSHNSGATSCLSDTEGNFWLNS* 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0768 749 Coils Coil 340 388 - -
Vra11g0768 749 Coils Coil 270 290 - -
Vra11g0768 749 Coils Coil 572 613 - -
Vra11g0768 749 Coils Coil 643 670 - -
Vra11g0768 749 SUPERFAMILY Tropomyosin 526 674 - -
Vra11g0768 749 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 749 - -
Vra11g0768 749 Pfam Filament-like plant protein, long coiled-coil 506 677 IPR008587 -
Vra11g0768 749 Pfam Filament-like plant protein, long coiled-coil 93 511 IPR008587 -
Vra11g0768 749 PANTHER FILAMENT-PLANT-LIKE PROTEIN 1 749 - -
Vra11g0768 749 Coils Coil 527 557 - -
Vra11g0768 749 Coils Coil 62 96 - -
Vra11g0768 749 Coils Coil 179 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0768 Vra-Chr11 6253877 6257874 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0768 - - gmx:100809230 1187.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0768 11 6253877 6257874 Vra11g0768 11 6253877 6257874 ECH