Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0764 ATGGAAAAGGCCAACGCTGTCGGATCCGGATCTGCCACCAACGGGGAGGTGTCTCCGCCGCCGCGGAAGGTGGCATTGATCACCGGAATCACCGGTCAGGACGGGTCTTACCTCACAGAATTCCTCCTTAACAAGGGCTATGAGGTGCACGGCCTGATCCGTCGCTCCTCCAACTTCAACACGCAGCGTATCGATCACATATACGTAGATCCCCACAACGCCCACAAGGCGCACATGAAGCTCCACTACGCGGATCTCTCTGACGCCTCCTCGCTCCGCCGCTGGCTCGATACCATCCTTCCGGACGAAGTCTATAACCTCGCTGCCCAGTCTCACGTTGCCGTTTCCTTCGAGATCCCTGACTACACCGCGGATGTCGTCGCCACCGGTGCCCTCCGCCTCCTTGAGGCCGTCCGCTCCCACATCGCCGCCTCTGGCCGCTCCCACATCCGCTACTACCAGGCCGGGTCCTCCGAGATGTTCGGCTCCACCCCACCGCCGCAGTCCGAAACCACCCCCTTCCACCCACGCTCCCCCTACGCCGCCTCCAAATGCGCTGCACACTGGTACACTGTGAACTACCGTGAGGCCTATGGACTCTACGCCTGCAATGGCATTCTTTTCAACCACGAGTCCCCTCGCCGCGGCGAGAATTTCGTGACGCGCAAGATCACGCGGGCCGTGGGCCGGATCAAGGTCGGTCTCCAAAACAAGCTCTTTTTGGGGAACCTTCAGGCCTCCAGGGATTGGGGCTTCGCTGGGGACTATGTTGAGGCCATGTGGCTGATGCTGCAGCAGGAGAAGCCCGATGACTATGTTGTAGCCACCGAAGAGTCTCACACGGTTGAGGAGTTCTTGGAAGTGGCTTTCGGCTATGTGGGACTCAATTGGAGGGATCATGTGGTGATTGACAAGAGGTACTTCCGTCCTTCTGAGGTTGACAACCTCAAAGGGGACGCCTCTAAGGCGAAGAAGGTGCTTGGTTGGAAACCTAGAGTGGGGTTTGAGCAACTCGTTAAGATGATGGTTGACCAGGACATTGAAATGGCTAAGAAGGAGAAGGTTCTTGTTGATGCTGGCTACATTGATGCTCAGCAACAACCTTGA 1107 0.5772 MEKANAVGSGSATNGEVSPPPRKVALITGITGQDGSYLTEFLLNKGYEVHGLIRRSSNFNTQRIDHIYVDPHNAHKAHMKLHYADLSDASSLRRWLDTILPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHIAASGRSHIRYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAYGLYACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQNKLFLGNLQASRDWGFAGDYVEAMWLMLQQEKPDDYVVATEESHTVEEFLEVAFGYVGLNWRDHVVIDKRYFRPSEVDNLKGDASKAKKVLGWKPRVGFEQLVKMMVDQDIEMAKKEKVLVDAGYIDAQQQP* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0764 368 CDD GDP_MD_SDR_e 24 348 - -
Vra11g0764 368 PANTHER GDP-MANNOSE 4,6-DEHYDRATASE 16 363 IPR006368 GO:0008446|GO:0019673
Vra11g0764 368 MobiDBLite consensus disorder prediction 1 21 - -
Vra11g0764 368 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 23 348 IPR036291 -
Vra11g0764 368 Pfam GDP-mannose 4,6 dehydratase 26 342 IPR016040 -
Vra11g0764 368 Gene3D - 26 332 - -
Vra11g0764 368 TIGRFAM gmd: GDP-mannose 4,6-dehydratase 23 349 IPR006368 GO:0008446|GO:0019673
Vra11g0764 368 Hamap GDP-mannose 4,6-dehydratase [gmd]. 23 352 IPR006368 GO:0008446|GO:0019673
Vra11g0764 368 PANTHER GDP-MANNOSE 4,6 DEHYDRATASE 1-LIKE 16 363 - -
Vra11g0764 368 Gene3D - 216 342 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0764 26 208 Miscellaneous Gene Families AT4G12250 28.421 5.96e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0764 K01711 - gmx:100777692 711.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0764 11 6227244 6228776 Vra11g0764 11 6227244 6228776 ECH