Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0717 ATGGCGCATTCTCGGCAACCGAACAAAGCTGGCGTCACGCTCTCCAACAAGACCAACACCAATGGGACCTTCTCCTCCAGTAAGACTCTCTACGACGACGTTTACGGTGGTCCTCCCAAGTTCGCCGTTTCAACCCTCTCCCCTCGTTTCGAAGACTACCGTGAGATTTTCGGAAGCTTCCACACCGCACGCGCTTCCTCCATTCCACTGCTCGATCTTCCCGCCGTCCACGACGCCGAGGCCTTCTTCGATCCCCGAAGCCACTCTTTCAACTACACCGAAGTTTTCGGTGCGTTGGATTTTGAGCTTCCGTCCGACAACTTATTTCACCGCCACACTGCTCTCAACGCTGCCTCCTCTGAAGAAGCCTGGAGTCCTGCAGAAACTGATTCATTTTCTGAAGAGTTAGATCAATCTGCAATTAATCAAAGCATTTTGAATGGAAATATTTTCCACTCCGTTGATGGTAATGTGGGATCGAACATTCTGTATCATAAGGTCAATGGTACAAGAAATGAACATATGTCAAAGGGGAAGAATCAATCAAGTCAGCTGCATGCTGTTCCTGGTTACGGACAAGTATACGATGAAACTACAGAATTGCATCGAACTGATTCCTCCTGTCTAGTTGCTGATGATATTGATCTTGATCTTGATATGGAATTTAGTACCGAGAAAGTGAAGGGGAACCAACCAAGGGCAACAACCATGTCAAAACTGCGCAATTTTACCTCCGGGGAACAGACTTTTGACAGTGATCTAAATCTTCAAAATGCAGGAAGCAAAAAGGATTCTCATTCTGGTGAGATGTTCATAACTGTGTCTGACATCAACCTCAGAAGTATCCCTTCTCAAGTGCCTCCCCCATCTCGTCCACCTCCTGTACTGGATGCAAAAAAGGACATGTGTGGACTTCATTCAAACAGCAGACTGGTTGTTTCTGAAGAGACACCTGGTGCTGTTTCACCACCTTTCTTTGATGCGGAGGATCATATGAATTCATCTGCTACAGCTTCTGCTGGTGCTATGAATGAAGCAATGCTTAGAGCAGAAGCACAACTTAGAAGTACCAAAGAATTAAAAGGGAGAAAGAAATGGGATTGTGAAACCTATTCAAAATCAAGTTATGATGCAAAAGTTAATAAAGCAAAGATGTGTAAGGATATCACTGGATTAAATAGCTTGAATGATGAGACAGCTCTGGGAAGTTATGACTGGAGACATTCAAAAGCAAAATTATATGTCACAGATGACAGGCAGGAATTTAAGAAATCTTCCCCAGAAACTATGGAAAATTTAGAAGGGAAAAGCGCAGTAAGCATGTTTGAGGAAAAGAACAAGATGGAATCCCGATCATCTATAGAATCCGATGGAAGCACAGAAGTTGGAACATGGAAAGATGAATCTGATTTTTTTGAATTAGCGGGAATGGAAGAATCTAGAATGGTAACTCAAACTGCAAAGCAGAGTAAGAATTTGGTGCACGGTACTGGAGCTCAAAAACATGGTCAGAAGGAAAGAGAGGCATCTAATGTGCAAGAAAAGCGTAAACAAGTAAAAGCAACTGAAGGAAACTATCAGGTGGAGGAGTATGAGAAAAAATATAAAGCAACAAAAGAGGTTCGTGAACATGATGAAAACATTATGAATCCTGAAGCATCTAATTTGAAACGGAGGCAAAGAGAGCACATGAAAATGGAAAAAATGCCCAAAGTATTTGAGGAGGAAGAAAATGAGAAGACTATAAAAATAGCCCACCAACATGGAAAAAGTGAAAAGAAAGTAACTGAAGCTGACCAATATGCAATCATGGAAGACATATGTGAGATGGGACACAGAGAGCATAAACAAGCAGAAACCCAGGAACCCACAGAAGTGGATAGGCAAACAGCAAATGACATTCGGCAGGCCACAGGACTTAGGGAAAATCAGAAGAAACTAAGGGATGTTGAAAAGCAACAACAGAACGTGAGTAGGCGCAAGCAATCTGAGAAAATGGAGGAAAATAGAAAAACACAAAGCGAAGCTTTTGCTATAGGACAAACTGACCAGGAGGAAAAACTGAAAGGTTCTGGGAAGCTGGAAAATATTGTTGAAGGATCAAATGTGGTTTTTGAATCTGATCACACCGAGGAAACATGCAAAAGTGAAAAAGAAATGAGATTGAAACTAGGTAAACGGATTCAGATGAATAAGGGACTGAAAGAAGCTCACGAAAGAGTAGAAATTGAGAAAAACCTCAAAAGTTCTTTTGAAAACGAAGAAAGTGATGGAGGCGTAATACCTGCTTTCAGGTGGGATGAGAATGGAAAGCGGCTTAAGGAAGACATTGAACTGGAAGTAAAGGAGATAAGGCTGAAAGAGGCTTCTAAGCAGAGGGAAAATAAGGCATATGAAAAATATCAAAGTACAAAGGAATTTGAAGACTTTTATGATGGGCATAGAGAAGGAAATAGACTTTCAGAATCAGGGGACGGGGAAGGGATTCAGAAAGTTATGAATCAAACTCCAGTGCAAGAACAGATTAATAGGATGCTGAGTGAGGATCAAAAGAAAAAAATCACTGAGAGCACATCAAGCCAAACATTTGCCATGGAAGGGAGTGTAGCTGTATCAAATGAGAATAGACACCTGGAGCAATCTGAGAATATGGACAAAGATCGTGGAATGGAAAAATGTAAGGGACTGAACAAGGCTTTGGATGACAAGGAACGGAAAGACGGGGGAAACGTGAAGAATGCTAAAGCAACTGATGAGACATGGGAAATAGAGAATGACGAAGATCTAGCTACTCAATCAGCCTCCATAGATGAAGAATTTATTAGGAAACTGAAGATATTTAAAGAATCTGCTGCTGACCAAAATATTGAAAAGATGAGAACTGAATGCAAAGTTGGAGAAAAGCAATTGAAAGGGGTAGAGATGGAAAATCAACTGGATAATGTAAAGTTCAGTGCACCTGAACAAATGACTGCAGGAGATGCAGAGCATTCAAAAACCCAGTCAGAAAAGGAGGAAGACACAGTGACAAAGGTTGATTGCAGAAGGAGCACGGAAACAGCTGAACCTGTTGTTCAGGAGACTGTAAATGCTCAGAAAACTGCCCAGTTGTTTCATATTGGTCAATCCACAGAAAGCAAAACTAAGAGTATTAATGAAAAATCTGCAATAATTAAAGATACTGAAAGGATGAAAAGAGAAAATGAGTCGGAAAATGATCATCTTAGAAAGATGGAAGAGGAGGTGGATATAGAAAGAGTACGAGAAAAAGAAGTTGAGAAAGCAGTGCTGGAGGCCGAGAGGGAGAGGGAAAGGGAAAAGGATAGGATGGCTGTTGATAGAGCAGCTTTTGAGGCTCGGGATAGGGCATACGCTGAAGCTTGTGAAAGGGAAGAAAGGGCTGCATTTGAAAGAGCAACTACGGAAGCACGGTACAAAGCTCTGGCTGAGGCCAGGGAAAGACTTATGAAGGCATGTGCTGAGGCCAGGGACAAGTCATACATTGATAAAGAAACTGCAGAGGCAAGATTGAAAGCAGAACGTGCTGCTGTAGAAAGAGCAACTGCAGAGGCTCAAGACCGGGCCCTGGAGAAGTTAAAGAATGAAAGGACTGCGTTTGAGTCCAGAGAACGGTTAGATAGATCTGTAACTGACAATTTTTGTGGAAGACAGGACTCTTCATCCTCAGATATGCTGGATCCACAGTTTCAGAACTCTAGCCCCTCAACGGTTTCCAGACATCCATATTCTCTTTATGGTGCTGCCTCTTTTTCTGAGAGATCAGAAAGAGAAGGTGAATCAGCTCAGAGGTGTAGAGCTAGACTGGAGAGGCATCGCCGAACAGCTGAGCGTGCAGCAAAAGCTTTGGCAGAAAAGAACATGCGTGACCTTCTAGCTCAGAAGGAGCAAGCTGAGAGAAATAGACTATCAGAGACTCTGGATGCTGAAGTAAGGAGGTGGTCAGGTGGAAAAGAAGGAAATTTGCGTGCCTTACTTTCTACATTGCAATATATCCTTGGGCCTGATTCTGGGTGGCAATCAATCCCATTGACGGAGGTCATTACTTCTGCTGCTGTGAAGAAAGCTTACAGGAAGGCCACCCTGTGTGTTCATCCTGACAAATTACAGCAACGTGGAGCTAGTATTCAACACAAATACATATGCGAAAAAGTTTTTGATCTTTTGAAGGAAGCTTGGAACAAATTCAACTCAGAGGAGCGGTAA 4224 0.424 MAHSRQPNKAGVTLSNKTNTNGTFSSSKTLYDDVYGGPPKFAVSTLSPRFEDYREIFGSFHTARASSIPLLDLPAVHDAEAFFDPRSHSFNYTEVFGALDFELPSDNLFHRHTALNAASSEEAWSPAETDSFSEELDQSAINQSILNGNIFHSVDGNVGSNILYHKVNGTRNEHMSKGKNQSSQLHAVPGYGQVYDETTELHRTDSSCLVADDIDLDLDMEFSTEKVKGNQPRATTMSKLRNFTSGEQTFDSDLNLQNAGSKKDSHSGEMFITVSDINLRSIPSQVPPPSRPPPVLDAKKDMCGLHSNSRLVVSEETPGAVSPPFFDAEDHMNSSATASAGAMNEAMLRAEAQLRSTKELKGRKKWDCETYSKSSYDAKVNKAKMCKDITGLNSLNDETALGSYDWRHSKAKLYVTDDRQEFKKSSPETMENLEGKSAVSMFEEKNKMESRSSIESDGSTEVGTWKDESDFFELAGMEESRMVTQTAKQSKNLVHGTGAQKHGQKEREASNVQEKRKQVKATEGNYQVEEYEKKYKATKEVREHDENIMNPEASNLKRRQREHMKMEKMPKVFEEEENEKTIKIAHQHGKSEKKVTEADQYAIMEDICEMGHREHKQAETQEPTEVDRQTANDIRQATGLRENQKKLRDVEKQQQNVSRRKQSEKMEENRKTQSEAFAIGQTDQEEKLKGSGKLENIVEGSNVVFESDHTEETCKSEKEMRLKLGKRIQMNKGLKEAHERVEIEKNLKSSFENEESDGGVIPAFRWDENGKRLKEDIELEVKEIRLKEASKQRENKAYEKYQSTKEFEDFYDGHREGNRLSESGDGEGIQKVMNQTPVQEQINRMLSEDQKKKITESTSSQTFAMEGSVAVSNENRHLEQSENMDKDRGMEKCKGLNKALDDKERKDGGNVKNAKATDETWEIENDEDLATQSASIDEEFIRKLKIFKESAADQNIEKMRTECKVGEKQLKGVEMENQLDNVKFSAPEQMTAGDAEHSKTQSEKEEDTVTKVDCRRSTETAEPVVQETVNAQKTAQLFHIGQSTESKTKSINEKSAIIKDTERMKRENESENDHLRKMEEEVDIERVREKEVEKAVLEAEREREREKDRMAVDRAAFEARDRAYAEACEREERAAFERATTEARYKALAEARERLMKACAEARDKSYIDKETAEARLKAERAAVERATAEAQDRALEKLKNERTAFESRERLDRSVTDNFCGRQDSSSSDMLDPQFQNSSPSTVSRHPYSLYGAASFSERSEREGESAQRCRARLERHRRTAERAAKALAEKNMRDLLAQKEQAERNRLSETLDAEVRRWSGGKEGNLRALLSTLQYILGPDSGWQSIPLTEVITSAAVKKAYRKATLCVHPDKLQQRGASIQHKYICEKVFDLLKEAWNKFNSEER* 1408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0717 1407 MobiDBLite consensus disorder prediction 610 692 - -
Vra11g0717 1407 MobiDBLite consensus disorder prediction 639 672 - -
Vra11g0717 1407 MobiDBLite consensus disorder prediction 856 877 - -
Vra11g0717 1407 MobiDBLite consensus disorder prediction 500 520 - -
Vra11g0717 1407 Coils Coil 640 667 - -
Vra11g0717 1407 MobiDBLite consensus disorder prediction 848 919 - -
Vra11g0717 1407 MobiDBLite consensus disorder prediction 1219 1249 - -
Vra11g0717 1407 MobiDBLite consensus disorder prediction 1259 1284 - -
Vra11g0717 1407 ProSiteProfiles dnaJ domain profile. 1343 1407 IPR001623 -
Vra11g0717 1407 Coils Coil 1058 1109 - -
Vra11g0717 1407 MobiDBLite consensus disorder prediction 1184 1284 - -
Vra11g0717 1407 Coils Coil 1170 1209 - -
Vra11g0717 1407 MobiDBLite consensus disorder prediction 538 564 - -
Vra11g0717 1407 MobiDBLite consensus disorder prediction 997 1020 - -
Vra11g0717 1407 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 6 709 - -
Vra11g0717 1407 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 735 1402 - -
Vra11g0717 1407 Gene3D DnaJ domain 1281 1407 IPR036869 -
Vra11g0717 1407 Coils Coil 1268 1319 - -
Vra11g0717 1407 Coils Coil 1145 1165 - -
Vra11g0717 1407 Coils Coil 956 976 - -
Vra11g0717 1407 MobiDBLite consensus disorder prediction 809 829 - -
Vra11g0717 1407 PANTHER AUXILIN, ISOFORM A 6 709 - -
Vra11g0717 1407 PANTHER AUXILIN, ISOFORM A 735 1402 - -
Vra11g0717 1407 MobiDBLite consensus disorder prediction 610 629 - -
Vra11g0717 1407 MobiDBLite consensus disorder prediction 878 919 - -
Vra11g0717 1407 MobiDBLite consensus disorder prediction 983 1023 - -
Vra11g0717 1407 MobiDBLite consensus disorder prediction 1184 1218 - -
Vra11g0717 1407 Coils Coil 774 794 - -
Vra11g0717 1407 MobiDBLite consensus disorder prediction 487 520 - -
Vra11g0717 1407 SUPERFAMILY Chaperone J-domain 1237 1406 IPR036869 -
Vra11g0717 1407 Coils Coil 734 754 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0717 Vra-Chr11 5773923 5779556 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0717 - - var:108335881 2468.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0717 11 5773923 5779556 Vra11g0717 11 5773923 5779556 ECH