Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0716 ATGGGAACCTTAGGCAGAGCTTTCTACGCCGTCGGATTTTGGATCCGAGAGACAGGCCAAGCCATCGATCGCCTTGGCTCTCGCCTCCAAGGCAACTACCTCTTCCAAGAACAGCTCTCTAGACATCGACCTCTGATGAATCTCTTCGACAAATATCCCTCCGTTCACAAGGATGCGTTTGTGGCCCCCAGTGCCTCCCTCCTCGGCGATGTTCACGTTGGCCCAGCTTCCTCCATTTGGTATGGATGTGTTCTCAGAGGTGATGTTAACGGCATAGTTATTGGATCTGGAACGAATATACAAGACAATTCTCTTGTTCATGTTGCCAAGTCTAATTTAACTGGAAAAGTCTTACCAACAATCATTGGAGATAATGTTACTGTAGGTCACAGTGCTGTGTTACAAGGATGTACCGTTGAGGATGAGGCATTTATTGGCATGGGTGCAACCTTGCTTGATGGTGTGTATGTGGAGAAACATGCCATGGTTGCTGCTGGAGCCCTTGTTAGGCAGAATACGAGGATCCCTTATGGAGAGGTTTGGGGAGGTAATCCAGCAAAGTTCCTGAGGAAGCTCACAGAAGATGAAATGGCCTTCTTCTCACAATCTGCCTTAAATTATTCCAATTTGGCTCAGGCTCATGCTGCTGAAAATGCAAAAGAACTTGAGGAGACCGAATTTGTAAAAGTTCTTCACAAGAAATTCGCTCCTCGTGGTGAGGAATATGATTCAATACTAGATGGTGGTCAAGAAACGCCCGCAAAGCTTAACCTTCAGGATAATGTTTTGCTAGACAAAGCTCCCAAGGCTTAA 813 0.4625 MGTLGRAFYAVGFWIRETGQAIDRLGSRLQGNYLFQEQLSRHRPLMNLFDKYPSVHKDAFVAPSASLLGDVHVGPASSIWYGCVLRGDVNGIVIGSGTNIQDNSLVHVAKSNLTGKVLPTIIGDNVTVGHSAVLQGCTVEDEAFIGMGATLLDGVYVEKHAMVAAGALVRQNTRIPYGEVWGGNPAKFLRKLTEDEMAFFSQSALNYSNLAQAHAAENAKELEETEFVKVLHKKFAPRGEEYDSILDGGQETPAKLNLQDNVLLDKAPKA* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0716 270 Gene3D Hexapeptide repeat proteins 44 223 - -
Vra11g0716 270 PANTHER YRDA, PUTATIVE-RELATED 1 270 - -
Vra11g0716 270 SUPERFAMILY Trimeric LpxA-like enzymes 45 212 IPR011004 -
Vra11g0716 270 Pfam Hexapeptide repeat of succinyl-transferase 119 151 IPR001451 -
Vra11g0716 270 CDD LbH_gamma_CA_like 54 212 - -
Vra11g0716 270 PANTHER DYNACTIN SUBUNIT P25 1 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0716 Vra-Chr11 5766565 5769967 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0716 K01726 - gmx:100794184 503.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0716 11 5766565 5769967 Vra11g0716 11 5766565 5769967 ECH