Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0707 ATGGCGGTTCAGGATGAGCATGACCCGATGCTCATGGTGCTTCCTTCTCTCTCTCCACCCAACACCTACCAAGCCGTCGTTATCGGTGGCACCTTTGACCGATTGCATGACGGCCACCGTCTCTTTCTCACTGCAGCGGCCGAGGTGGCAAAGGGCCGGATTGTAATTGGAGTTTGCGACGGTCCTATGCTGGCAAAGAAACAGTTTGCTGAACTGATACAGCCAGTTGAAGAAAGGATAAATAATGTCAAAAATTTCATTAAGTCTATCAAGCCAGATTTAGAAGTGCAAGCTGTACCAATCACAGACCCCTTCGGCCCTTCCATTGTAGATGAAAATTTAGAGGTTGTGATTGTGAGCAAAGAAACATTACCGGGAGGATTGGCAATAAACAGAAAAAGAGCTGAAAAAGGCCTTTCACTGTTGAAGATTGAAGTTGTGGATTTGCTTTCTGGAGAATCAGGTGAAATTAAGCTGAGTTCAACGATGCTACGGAAGATTGAGGCTGAAAAGGCGAAACAACAAAACACGATATCACAGACGTAG 546 0.456 MAVQDEHDPMLMVLPSLSPPNTYQAVVIGGTFDRLHDGHRLFLTAAAEVAKGRIVIGVCDGPMLAKKQFAELIQPVEERINNVKNFIKSIKPDLEVQAVPITDPFGPSIVDENLEVVIVSKETLPGGLAINRKRAEKGLSLLKIEVVDLLSGESGEIKLSSTMLRKIEAEKAKQQNTISQT* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0707 181 SUPERFAMILY Nucleotidylyl transferase 25 169 - -
Vra11g0707 181 Pfam Cytidylyltransferase-like 28 107 IPR004821 GO:0003824|GO:0009058
Vra11g0707 181 TIGRFAM cyt_tran_rel: cytidyltransferase-like domain 26 90 IPR004821 GO:0003824|GO:0009058
Vra11g0707 181 PANTHER DEPHOSPHO-COA KINASE-RELATED 10 177 - -
Vra11g0707 181 CDD PPAT_CoAS 26 166 - -
Vra11g0707 181 Gene3D HUPs 25 175 IPR014729 -
Vra11g0707 181 PANTHER PHOSPHOPANTETHEINE ADENYLYLTRANSFERASE 10 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0707 Vra-Chr11 5693125 5697324 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0707 K02201 K02318 gmx:100798626 301.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0707 11 5693125 5697324 Vra11g0707 11 5693125 5697324 ECH