Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0702 ATGCAACACTTCCTGCATCTCAACAAGCCAAGATATCGTATAGAACTTGGACACAAGGACGGAATGGCGAGCTTGGGGTGTTCCATGTCTGTCTTAACCTTTTTCTTCTTTGTATTTGTTGGCTTAATGTCTTCTTCATCTGAAGCTTCCGTAAAGAAATACCAGTTTGATATTCAAGTGGCGAATGTGAGTCGACTGTGTCATTCAAAGCCCATTGTAACGGTAAATGGGAGGTTCCCAGGGCCAACTATATATGTCAATGAAGGAGATAGAGTACTGATCAATGTTACTAATCATGCACAATACAACATGTCGATTCACTGGCATGGACTTAAACAATATCGTAATGGTTGGGCGGATGGACCAGCTTATATCACACAGTGCCCAATACAGTCAGGAAGAAGCTATACTTACGATTTCAATGTTACTGGTCAAAGAGGAACACTATGGTGGCATGCACACATTCTATGGCTGAGGGCCACTGTGTATGGTGCAATAGTGATTATGCCTACACCTGGAACACCATTTCCTTTCCCACAGCCAGACAGAGAATTTGAAATTCTCCTGGGTGAATGGTGGAACAATGATGTGGAAGAGATTGAAAATCAAGGGAACCAAATGGGGTTGCCACCAAATATGTCAGATGCACATACGATCAATGGGAAGCCAGGACCACTATTCCCGTGTTCTGAGAAGCACACATTTGCAATGGAAGTAGAACAAGGGAAGACTTACCTTCTGAGAATCATCAATGCTGCCCTAAATGACGAGCTTTTCTTTGCCATTGCCGGTCACACTTTGACGGTAGTGGAAGTTGACGCTGTTTACACCAAACCCTTCACCACTCAAGCTATACTAATTGCACCTGGTCAAACCACAAACGTTCTGGTCCAAGCTAACCAAGTTGCAGGTAGATACTTCATGGCCACCAAGGCCTTTATGGATGCTCCAATTCCAGTTGACAACAAAACTGCCACAGCTATACTCCAATACAAAGGCATCCCAAACACTGTCATCCCCATCCTTCCACAGTTGCCGGCTAGCAATGACACAAGTTTTGCTTTGAGTTACAACAAAAAACTAAGGAGCCTGAACTCTGCTCAGTATCCTGCTAATGTTCCTCTCAAAGTTGATAGAAATCTTTTCTACACTATTGGTTTAGGCCAGAATTCTTGCCCCACATGCGTCAATGGGACTCGGATACTTGCTTCACTAAACAATGTATCATTTGTGATGCCCCAAACTGCCCTTCTCCAAGCTCACTACTTCAATATCAAGGGGGTTTTCAGAACTGATTTCCCTGACCACCCTCCTACCCCTTTCAACTATACTGGTGCGCCACTAACAGCCAATCTCGCCACTTTAACTGGCACAAGAGTTAGTAAGATTGCTTTCAATTCCACGGTGGAGCTAGTTTTGCAGGACACCAATCTTCTCAGTGTTGAGTCACATCCATTCCATCTTCACGGCTATAACTTCTTTGTTGTTGGAACCGGGGTCGGTAACTTCAATCCTGCTAAAGACCCTGCCATGTACAACTTGGTAGATCCTATTGAGAGGAACACAGTTGGGGTTCCTACGGGCGGTTGGACTGCAATTCGTTTTCGGGCAGATAATCCAGGTGTTTGGTTCATGCATTGTCATTTGGAGCTGCACACTGGTTGGGGCTTGAAAACGGCTTTTGTTGTGGAAAATGGACCAGGACAAGATCAATCTGTTCGGCCTCCACCGAAGGACCTACCAACATGCTAA 1752 0.4481 MQHFLHLNKPRYRIELGHKDGMASLGCSMSVLTFFFFVFVGLMSSSSEASVKKYQFDIQVANVSRLCHSKPIVTVNGRFPGPTIYVNEGDRVLINVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCPIQSGRSYTYDFNVTGQRGTLWWHAHILWLRATVYGAIVIMPTPGTPFPFPQPDREFEILLGEWWNNDVEEIENQGNQMGLPPNMSDAHTINGKPGPLFPCSEKHTFAMEVEQGKTYLLRIINAALNDELFFAIAGHTLTVVEVDAVYTKPFTTQAILIAPGQTTNVLVQANQVAGRYFMATKAFMDAPIPVDNKTATAILQYKGIPNTVIPILPQLPASNDTSFALSYNKKLRSLNSAQYPANVPLKVDRNLFYTIGLGQNSCPTCVNGTRILASLNNVSFVMPQTALLQAHYFNIKGVFRTDFPDHPPTPFNYTGAPLTANLATLTGTRVSKIAFNSTVELVLQDTNLLSVESHPFHLHGYNFFVVGTGVGNFNPAKDPAMYNLVDPIERNTVGVPTGGWTAIRFRADNPGVWFMHCHLELHTGWGLKTAFVVENGPGQDQSVRPPPKDLPTC* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0702 583 SUPERFAMILY Cupredoxins 374 583 IPR008972 -
Vra11g0702 583 Pfam Multicopper oxidase 433 565 IPR011706 GO:0005507|GO:0016491
Vra11g0702 583 SUPERFAMILY Cupredoxins 178 364 IPR008972 -
Vra11g0702 583 PANTHER MULTI-COPPER OXIDASE 30 583 IPR045087 -
Vra11g0702 583 PANTHER LACCASE 30 583 - -
Vra11g0702 583 SUPERFAMILY Cupredoxins 52 195 IPR008972 -
Vra11g0702 583 Pfam Multicopper oxidase 58 170 IPR011707 GO:0005507
Vra11g0702 583 CDD CuRO_3_LCC_plant 428 566 IPR034289 GO:0005507
Vra11g0702 583 ProSitePatterns Multicopper oxidases signature 1. 541 561 IPR033138 -
Vra11g0702 583 Gene3D - 392 583 IPR008972 -
Vra11g0702 583 TIGRFAM laccase: laccase 49 583 IPR017761 GO:0046274|GO:0048046|GO:0052716
Vra11g0702 583 CDD CuRO_1_LCC_plant 54 168 IPR034288 GO:0005507
Vra11g0702 583 CDD CuRO_2_LCC_plant 187 331 IPR034285 -
Vra11g0702 583 ProSitePatterns Multicopper oxidases signature 2. 546 557 IPR002355 GO:0005507
Vra11g0702 583 Gene3D - 180 367 IPR008972 -
Vra11g0702 583 Gene3D - 42 170 IPR008972 -
Vra11g0702 583 Pfam Multicopper oxidase 187 333 IPR001117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0702 Vra-Chr11 5678484 5680999 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0702 K05909 - gmx:100779180 1093.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0702 11 5678484 5680999 Vra11g0702 11 5678484 5680999 ECH