Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0690 ATGGAGGCCGACGCTATGGCCATGGAATCAACGGAGTTAAAGGTGTCGGAGCTATTGAAAGAGGTCAACGTAGATTACTCTCTTCAGTTTAGTAAGCTCGTTGACAACACCGTTTCCGCCATCAAAGCCTCCATAGACAAAATCCCCAACGATTTCAAGGTAACTGCAGATTTAGCATCCCGGTTTGTTGCGGACATTGGCGCCGATAAGGTCGAGTTTAAGTTTAAGAAGCCAGAGTTTATTAAGACCGGTGGGAGTTACTCCACACAGAGTATTGCGAGGCCTGAAGTTAATGTTGATCTTATTATCAGGTTACCAAAGGAATGCTTCCACGAGAAGGATTATTTAAATTACAGATACTATGCCAAGAGGTGTTTGTATTTATGTTTGATAAAGAAGTATTTGGAGAGATGTTCATCTGTTGATAGGGTCGAATGGTCCACTATGCAGAATGAAGCCAGAAAACCCTTGCTCATTGTGTATCCAGCTGCGAAGCTTGTTGAAGTTCCTGGTTTTTTTGTAAGAATTATTCCGTCCGCGAAGGCTATATTTAGCATAGCGAAGTTGAACATGAAGCGCAACAACATTCATAACCTGAGTAATGGGATTGATCTTCAGGCCACACCGAAGTACAATTCTAGTATTCTGGAAGACATGTTTATAGAGGATGCTGAATTCGTGAACAAGTATTTTGTTGGATGGAAGGAACTAAAGGAGGCTTTAATCCTGCTTAAGGTTTGGGCCCGGCAAAGAAGTTCAGTATATGTTCATGATTGCCTGAATGGGTTTTTGATTTCTGTCATACTGGCATACCTTGCTTCTAAGCAGCATATTAGCAATTCAATGAAGGCTACTGAAATAATCCGCGTCACCTTGAACTTCATTGCAACCTCAGAGTCGTGGAACCGAGGGTTATACTTTCCAAAGGAAGGCCAGATCCATATTACGAAGGAGCAAAAGATTCAACTAAGAGAGTCATTTCCAATTCTCATATGTCATCCGTCTGGAGGATTCAATCTAGCTTTCCGAATGTCCAGGATTGGTTTTACTCGGCTTCAAGAAGAGGCTGCTATGACACTTAGGTGCTTAGAAAAGTGTAGAGATGGTGGATTTGAGGAAGTTTTTATGACCAAGATTGACTATGCTGTTAAGTATGACTATTGTATGAGAATAAATTTGAAGGGAAAGAAGGAGGTATTTGCATTGGGATTTTGTTTGGACGATGAGTGCTGGAGAGCATACGAGGATAAAATACATGGTATTTTATCTAAAGGGTTAAATGATAGAGCAAGAGCCATTCAAGTTACGTGGAGAAATACACAATGCCGGTGGAGTGTGGACGATGGCTTGTCGGTATTTGATAAAGAGCCCTTATTCATCGGAATTTCAGTGAGTACTTTGGAGAAAGCATATAGGATGGTTGATATCGGCCCAAATGCTGAAAGTAAAGAAGAGGCTCTTGAATTTCAAAAGTTTTGGGGAGAGAAAGCAGAGCTTCGAAGATTTAAAGATGGTAGAATTGCAGAAAGCACAGTATGGGAAAGTGAGCAATGGGCTAGATATCTTATTTTGAAAAGAATAGCAGAGCATGTACTTAGTCGACATCTTTCTATATCCACGGAAGATATTGTAGTTGTTGTGGATCAACTTGATTTCTCTTTGATTCACAGTGCTGGAGATCCTATATCATACGCTGGTAGTTTGCTTGGGGCATTTGATGTTTTATCAAAGCGCTTGCGTCTTATTGAAGACCTTCCATTGAAGGTGTCCAGTGTACTGCCTTTAGACTCTGCTTTTAGGTATACATCAGTGTTCCCTCCGGAACCTCATCTTCTAGCGAATGAAAAAATTGAATCTCTGAGATTGAATAAGTTCGTTCCATCATGCATTCAAGCACTGGAAGTTCTGATTCAGCTGGAAGGTTCTGGGAACTGGCCAATGGATGAAATTGCAATTGAAAAAACAAAATCTAGCTTCCTTTTTCAAATTGGATTGAGTCTTCAAAAGAAGTGGGGGATGACATGCACTGCCACTGAGGATAATGTGGACGTACTAATGTCAGGATATGCTTTCCGTCTAAAAATTTTGCATGAGAGAGGCCTGAGCTTGCTAAAAAAGGAAGTTGGGGATGTTCAGGCTAAGCAAGTTTCTTCCATTGACAAGAACCTTTTTATCCGTAGTCAACATGCTAATATGATCAATGGATTACAAAATCGTTATCCAATATTTGGACCAGTAGCTAGACTTGCAAAACGATGGGCTGCTTCACATCTATTTTCAGCTTGCTTGGTAGAAGAGGCTGTTGAACTATTGGTTGCATATCTTTTTCTTAATCCTTTGCCATTTGATGTTCCCTGTTCACGGATCACTGGGTTTTTGAGGTTCCTGCGATTACTCTCAAACTATGATTGGACTTTCTCTCCATTGGTTGTTGACATAAATAATGACTTGAGCCAAAGTGACGAGAAAGAAATAAATGACAACTTTTTGGTAAGAAGAAAAAGTCAGGGTGAGAGTGGACAAAGTGTAGGACCAGCAATGTTCTTAGCCACAGTTTACGATAAAGAATCTGAGGCTTGGACTGGATTATCACCTAGTGGAATGGAACTGAGAAGGTTAGTTGCATATGCCCGAAGCAGTGCCAATTTGCTGACAAAACTCACATTTCAAGAAGAGTTTGGTCCATACCGATGGGAGTGCCTTTTCAGGACTCCTTTAAACAATTATGATGCAGTAATTCTTCTCCACAAGGACAATCTCCCGTATCCCCAAAGGCTTCTCTTCCCTTCAGAAGTTAATCATGGAATACATGTTGCAGAAGGACAAGCCAGCAAGTGTTTTCAACCCTTTTTGTTGCCTAAAGATTTGAAGGGCAGGCCAGAGGAACTTAAAAATAAGTTGCTGGTGGATTTTGATCCATCAAAGTGCTTTATCAGAGATTTAAAGCATGAGTTCTCAGCCTCATTCCAAGTATGGCATGATTATCTGGGAGGCGATATTATTGGCCTAACATGGGGGGAATCATATTCTTCCAAGCGAAAGCACGTGGAAGTGGTTGATGAAGAATATAATCCTTTGAAGGTGTTAAAAGCAGTGGGGGAAATTGGGAAAGGATTTGTGAGGAGTGTATACTTTCTCAAGCCCCCAAGGCTCAGGGATTAG 3162 0.4096 MEADAMAMESTELKVSELLKEVNVDYSLQFSKLVDNTVSAIKASIDKIPNDFKVTADLASRFVADIGADKVEFKFKKPEFIKTGGSYSTQSIARPEVNVDLIIRLPKECFHEKDYLNYRYYAKRCLYLCLIKKYLERCSSVDRVEWSTMQNEARKPLLIVYPAAKLVEVPGFFVRIIPSAKAIFSIAKLNMKRNNIHNLSNGIDLQATPKYNSSILEDMFIEDAEFVNKYFVGWKELKEALILLKVWARQRSSVYVHDCLNGFLISVILAYLASKQHISNSMKATEIIRVTLNFIATSESWNRGLYFPKEGQIHITKEQKIQLRESFPILICHPSGGFNLAFRMSRIGFTRLQEEAAMTLRCLEKCRDGGFEEVFMTKIDYAVKYDYCMRINLKGKKEVFALGFCLDDECWRAYEDKIHGILSKGLNDRARAIQVTWRNTQCRWSVDDGLSVFDKEPLFIGISVSTLEKAYRMVDIGPNAESKEEALEFQKFWGEKAELRRFKDGRIAESTVWESEQWARYLILKRIAEHVLSRHLSISTEDIVVVVDQLDFSLIHSAGDPISYAGSLLGAFDVLSKRLRLIEDLPLKVSSVLPLDSAFRYTSVFPPEPHLLANEKIESLRLNKFVPSCIQALEVLIQLEGSGNWPMDEIAIEKTKSSFLFQIGLSLQKKWGMTCTATEDNVDVLMSGYAFRLKILHERGLSLLKKEVGDVQAKQVSSIDKNLFIRSQHANMINGLQNRYPIFGPVARLAKRWAASHLFSACLVEEAVELLVAYLFLNPLPFDVPCSRITGFLRFLRLLSNYDWTFSPLVVDINNDLSQSDEKEINDNFLVRRKSQGESGQSVGPAMFLATVYDKESEAWTGLSPSGMELRRLVAYARSSANLLTKLTFQEEFGPYRWECLFRTPLNNYDAVILLHKDNLPYPQRLLFPSEVNHGIHVAEGQASKCFQPFLLPKDLKGRPEELKNKLLVDFDPSKCFIRDLKHEFSASFQVWHDYLGGDIIGLTWGESYSSKRKHVEVVDEEYNPLKVLKAVGEIGKGFVRSVYFLKPPRLRD* 1054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0690 1053 Pfam Nrap protein domain 3 382 537 IPR035368 -
Vra11g0690 1053 PANTHER NUCLEOLAR RNA-ASSOCIATED PROTEIN 8 1045 IPR005554 -
Vra11g0690 1053 Pfam Nrap protein PAP/OAS1-like domain 5 740 892 IPR035370 -
Vra11g0690 1053 Pfam Nrap protein domain 1 99 223 IPR035082 -
Vra11g0690 1053 Gene3D - 209 381 - -
Vra11g0690 1053 Pfam Nrap protein nucleotidyltransferase domain 4 566 737 IPR035369 -
Vra11g0690 1053 Pfam Nrap protein domain 6 906 1043 IPR035371 -
Vra11g0690 1053 Pfam Nrap protein PAP/OAS-like domain 237 378 IPR035367 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0690 K14544 - gmx:100776157 1879.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0690 11 5563502 5572970 Vra11g0690 11 5563502 5572970 ECH