Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0665 ATGTTAACAATGGAGCCTCAGAGAAAAGCTTTGGCATTATCTTGGATCTTGATCTTCTTCCTTTCCATTTCCCTGTGTGGGGTGAAGGCATCAAGTGAAGGGCACCATGGCGAGCCTCAAGAGGGACCTCTGGTGACGAAGGATCAGAGGACGACATTACTTGCCACTGAGTTCGGACAGATAACCGCCCTTGACATCAAGGAAGAACCAGATAAACTTCCTTACCATCTTCAGTTCATCACATTGGAGCCAAACTCGCTATTTCTTCCTGTGCTTCTACATGCAGATATGGTCTTTTATGTTCATACAGGGAGTGGAAAGCTGACTTGGGCATACGATGATGATACTGGCACGATCCCTTTACGCGAAGGAGATGTCTGTAATCTCAATGAAGGATCTGTTTTCTATATACAGAGTGACTTAGAGGCTGAGAGAAGGAAACTCAGGATCTATGCAATGTTAACCAATACAGAAGACAATACTTATAATCCATCAATCGGTGCTTACTCAAGAATCGACCAACTGGTCAAGGGCTTTGATAAGAGAATCATGCAAGCAGCTTTAAAGGTACCAGATGATTTGATAGAAGAAATCATCAACAAGAAAAATACCCCAGCTGTAGTGCATGCGGATTCAAAGAAGACGAATATTGTCAAGACACTGGAGGCTTCGTTTCTTAAAAAATTTGTGGGTGTTGGGTCCAGCTCCAATACTCTCGAAAAATATAACATCCTTGATCATGAACCTGACTTCAAAAATCGTTATGGTAGGAGCGTAGCAGTATCCAAAAAGCAACTAAAGTCATTGAAGCGAACGAACATTGGATTTCTTATGGTGCAGTTGAACGAGGGATCAATAATGGGGCCTCATTGGAACCCGAAGGCAGCAGAGTTGGCAGTGGCAGTAGCAGGGAAAGGCATGGTCCGAGTGGTAAACGGAAGCAGCAATGAAGGTGATACAGTAAGGCAAAGCATGAGGTTTAAGGTTAACGCCGGTGATGCTTTTGTGGTGCCTAGGTTTCATTCAATGGCTCAGATGGCATTCAACGATGAACCGTTTGTTTTTCTGGGCTTCAGCACTTCAGCGAAGGACAACCATCCTCAATTTTTTACGGGAAAGGGATCTGTGCTTCACAATCTAGACAAGCATATACTTGCTACCTCTTTGGGTGTGAGTGACAGAACCGTTGACGAACTTCGGCGTTCTCCCAGAGATTCCATCATTTTCGCGTGCCCTTCCTGCGCAGAGGAAGAGGAGAGTACAATGAAGGAGGAAGAAAGGGAGAGGGAGGAGGAGGAGGAAGAAAGGGAGAGGAAGGAGGAGGAAAGTGAGAGAAAAAGAGAAGAGGAGGAGGAGAGAAAAAGAGAAGAAGAGGAAGACAGGGAGAGAGAGAGAAAGAGGGAGAGAGAGGAAGAGGAAGCCAAAATACAACAAGAAGAGAGGGAAAAGAAGCGTGAGGAGGAGGAAGAGAGGGAGCAAGAAGAAGGTGGGAGAGAGAAAAAAAGGGAAAGGGAAGAAGAGAGGGTGAGGGAGGAAGAAGAAGCTAAAAGGCAACAGGAGAAGAGGGAAAAGAAAAGAGAGAAAGAAAAAGGGAAAGAAGCAGAAGCCAAGAAAGAGCAAGAAAAGAGAGAAATGAGGAGACAAGAGGAGGCTGAAAAGGAGCAAGAACAAGATAAGAGAGGAGGGGAAGGGGAAGAGGAAGCAGCAGCACAGAAGGAGCAAGAACAAGCTAAAAGAGAGCAAGAAAAGAGAGAAAAGAAGCGACAGGAGGAGGAACAAAGCGAAGGAAAAGAAGAAGATCCGACATGGTGGGAGAGACCGAGGAGAGAACAGGGGAAAGGATCAGAAGAAGAAGTAGCAGAGCAGGAGCAAGAACAAGCCAAAAGACAACAAGAAGAAAGGGAGAAAAGAAGAGAGCATGAGAGTGATCCTGTTCACTTTGAAGGAAGGAGAGCTTTGAAAGTCAGAAACCTTTGA 1977 0.4527 MLTMEPQRKALALSWILIFFLSISLCGVKASSEGHHGEPQEGPLVTKDQRTTLLATEFGQITALDIKEEPDKLPYHLQFITLEPNSLFLPVLLHADMVFYVHTGSGKLTWAYDDDTGTIPLREGDVCNLNEGSVFYIQSDLEAERRKLRIYAMLTNTEDNTYNPSIGAYSRIDQLVKGFDKRIMQAALKVPDDLIEEIINKKNTPAVVHADSKKTNIVKTLEASFLKKFVGVGSSSNTLEKYNILDHEPDFKNRYGRSVAVSKKQLKSLKRTNIGFLMVQLNEGSIMGPHWNPKAAELAVAVAGKGMVRVVNGSSNEGDTVRQSMRFKVNAGDAFVVPRFHSMAQMAFNDEPFVFLGFSTSAKDNHPQFFTGKGSVLHNLDKHILATSLGVSDRTVDELRRSPRDSIIFACPSCAEEEESTMKEEEREREEEEEERERKEEESERKREEEEERKREEEEDRERERKREREEEEAKIQQEEREKKREEEEEREQEEGGREKKREREEERVREEEEAKRQQEKREKKREKEKGKEAEAKKEQEKREMRRQEEAEKEQEQDKRGGEGEEEAAAQKEQEQAKREQEKREKKRQEEEQSEGKEEDPTWWERPRREQGKGSEEEVAEQEQEQAKRQQEEREKRREHESDPVHFEGRRALKVRNL* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0665 658 Coils Coil 414 559 - -
Vra11g0665 658 Coils Coil 563 600 - -
Vra11g0665 658 CDD cupin_7S_vicilin-like_C 249 406 - -
Vra11g0665 658 MobiDBLite consensus disorder prediction 410 658 - -
Vra11g0665 658 MobiDBLite consensus disorder prediction 423 438 - -
Vra11g0665 658 Gene3D Jelly Rolls 38 221 IPR014710 -
Vra11g0665 658 Pfam Cupin 242 396 IPR006045 -
Vra11g0665 658 PANTHER PREPROMP73 13 456 - -
Vra11g0665 658 MobiDBLite consensus disorder prediction 439 658 - -
Vra11g0665 658 CDD cupin_7S_vicilin-like_N 53 214 - -
Vra11g0665 658 Coils Coil 613 640 - -
Vra11g0665 658 Gene3D Jelly Rolls 233 413 IPR014710 -
Vra11g0665 658 PANTHER OS03G0336100 PROTEIN-RELATED 13 456 - -
Vra11g0665 658 SMART Cupin_1_3 242 397 IPR006045 -
Vra11g0665 658 SUPERFAMILY RmlC-like cupins 7 402 IPR011051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0665 Vra-Chr11 5324952 5327693 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0665 9 422 Miscellaneous Gene Families AT2G18540 41.986 1.34e-104 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0665 - - pvu:PHAVU_002G027900g 669.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0665 11 5324952 5327693 Vra11g0665 11 5324952 5327693 ECH