Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0658 ATGCAAGAAAAGAAGGCATTAAGGAAGAGCATGGTGGGGACGTGTCCAGCCGTTCCTTTAATTGAAGGAAGCGAAGATGAGAGAGTGACATCACCAATCATTCTAAGATACTCAAAACAACTCTCAATAATCTTTTCTCTCAAATTTTCAAATCTTCAAATCTCACTCCCACACTTTCATGCTTCTATTCTCTTTCTCTTACCAAAATTATACCTCCAATCTGCATTTTACATTCCCAATTTCTGCATAATGGGTAAAGGTGCCGGTTGTATTCCCAGCAAGAATAGGCCACCGCCGGTCGCCGACGACCCTCCTACACACTCCGACCAACCTCCCTCGCTCCCGCCCAACGCCCGCGCGAGTGAACCCGACGCGCCACCACGGCAAGACACTGCGAGTTCGTCGTCGCTCCCCGGCGATGCGAAATTGAAGATCTTCATCGTCTTCTATTCGATGTACGGACACGTGGAGGGGTTGGCGAAGAGGTTGAAGCGAGGCGTCGATGGCGTGGAAGGTGTGGAAGGGGTTTTGTATAGGGTTCCGGAGACATTGCCGATTGAGGTACTGAATCAGATGCGGGCGCCACCAAAAGACGACTCCATACCGGAGATTGCGCCTGAGGATTTGGAGGCGGCGGATGGATTGCTGTTTGGGTTTCCGACGAGGTACGGCGCCATGGCTTCGCAGATGAAGGCTTTTTTTGACTCCACTGGGAATTTGTGGAAGGGGCAGAAGCTTGCGGGGAAACCCGCAGGGTTCTTTGTCAGCACTGGGACTCAAGGAGGAGGCCAAGAAACTACTGCTTGGACGGCAATCACTCAGCTGGCACATCATGGAATGCTTTTTGTTCCGATTGGATATACATTTGGACCCGGAATGTTCAAGATGGATTTCATTAGAGGGGGTTCTCCGTATGGTGCTGGAGTGTTTGCCGGTGATGGTACAAGAGAGCCAAGTGAAACAGAGCTCGCTCTTGCAGAGCATCAGGGCAAGTATATGGCTGTTGTAGTGAAGAGGCTGGCCAAGTCATGA 1032 0.5097 MQEKKALRKSMVGTCPAVPLIEGSEDERVTSPIILRYSKQLSIIFSLKFSNLQISLPHFHASILFLLPKLYLQSAFYIPNFCIMGKGAGCIPSKNRPPPVADDPPTHSDQPPSLPPNARASEPDAPPRQDTASSSSLPGDAKLKIFIVFYSMYGHVEGLAKRLKRGVDGVEGVEGVLYRVPETLPIEVLNQMRAPPKDDSIPEIAPEDLEAADGLLFGFPTRYGAMASQMKAFFDSTGNLWKGQKLAGKPAGFFVSTGTQGGGQETTAWTAITQLAHHGMLFVPIGYTFGPGMFKMDFIRGGSPYGAGVFAGDGTREPSETELALAEHQGKYMAVVVKRLAKS* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0658 343 MobiDBLite consensus disorder prediction 97 122 - -
Vra11g0658 343 ProSiteProfiles Flavodoxin-like domain profile. 145 333 IPR008254 GO:0010181
Vra11g0658 343 TIGRFAM flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 144 340 IPR010089 GO:0003955|GO:0010181
Vra11g0658 343 MobiDBLite consensus disorder prediction 94 136 - -
Vra11g0658 343 PANTHER NAD(P)H DEHYDROGENASE (QUINONE) FQR1-LIKE 2-RELATED 90 342 - -
Vra11g0658 343 Gene3D - 141 341 IPR029039 -
Vra11g0658 343 SUPERFAMILY Flavoproteins 144 340 IPR029039 -
Vra11g0658 343 Pfam NADPH-dependent FMN reductase 159 285 IPR005025 GO:0016491
Vra11g0658 343 PANTHER FLAVODOXIN-RELATED PROTEIN WRBA-RELATED 90 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0658 Vra-Chr11 5267426 5269624 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0658 K03809 - gmx:100811224 432.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0658 11 5267426 5269624 Vra11g0658 11 5267426 5269624 ECH