Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0657 ATGGAAGACACACTTTCAGGGTTGAGGTCTTTGATGGCTACTCACTCACCTCCACTCGATGCCTTAGTTGTACCCTCTGAAGATTATCACCAGAGCGAATACGTATCTGCACGAGACAAGCGCCGCGAATTCGTTTCCGGCTTCACTGGAAGCGCTGGCTTAGCACTCGTAACAAAGAACGAAGCGCTGCTTTGGACGGATGGAAGATATTTTTTGCAGGCTAGCCAAGAGCTTAGTGCTCAATGGAAGCTAATGCGTATTGGTGAAGATCCTGCTGTAGATATCTGGATAGCTGATAACTTGCCAAAAGACGCATTTATTGGGGTTGACCCTTGGTGCATTTCAATTGATACTGCTCAAAGATGGGAGCGAGCTTTTTCCGAAAAACAGCAGAAGCTAGTTCAAACCACAAAAAATTTGATCGATGAAGTTTGGATAAATCGACCGCAGGAAGAGATTAATGCTGTTATTGTACAGCCACTGAAATTCGCAGGTCGCTCTGTTGCAGATAAGTTAAAAGATTTGAGAAAAAGGCTTCTGCAGGAGCAAGCCCGCGGTATAATTTTCACAGCACTTGATGAGGTTGCGTGGCTGTATAATATTCGTGGAAGTGATGTAGCCTACTGTCCTGTTGTTCATGCATTTGCTATTGTGACAGCCAATTCTGCTTTCCTTTATGTGGACAAGCGAAAGGTTTCTGTTGAGGTTCAAGCTCATTTAGTGGAGAATGAAATTGAAATTCGAGACTATACAGCTGTAAGCTCTGACGTGACATTGCTTGCAACTGACGATCTTGATACTGTATCTACTGTCAAGAGAGTAAATGGTGGACATCAAGCAGAAGAAAACAGCAACAACCTGATATGGGCTGATCCAGGTTCATGCTGTTATGCACTGTATGCAAAGTTGAACCCTGATACAGTTCTGCTGCAGCAATCACCTTTGGCCCTTGCAAAAGCTTTAAAGAACTCAGTGGAGTTGGATGGGTTAAAAAAGGCACATATTCGTGATGGTGCAGCAGTCGTGCAATATCTTGTCTGGCTGGATAAGAAGATGCAGGATGTTTATGGAGCTTCTGGTTACTTTTTGGAGAAGGAATCTGCCAAAAAGGAGAAACAGCTGCAGTCCTTGAAATTGACTGAGGTGACTGTAAGTGACCAGCTTGAAAGTTTCCGAGCATCCAAAGAGAATTTCAAAGGATTGAGTTTCCCCACTATTTCGTCTGTTGGCTCAAATGCAGCAATCATTCATTATTCTCCAAAGGCTGAAGCATGTGCTGAACTTGATCCAGACAAAATTTATCTCTTTGATTCTGGAGCTCAGTATCTGGATGGAACAACAGATATTACACGAACAGTTCATTTTGGGAAACCTTCAACTCATGAAAAAGCATGTTATACAGCAGTCCTAAAGGGTCACATTGCTCTTGGAAATGCTAGATTTCCTAATGGGACTAATGGGCATGCTCTTGACATTCTTGCCCGAATTCCTTTGTGGAAAGATGGTCTTGATTATCGACACGGTACTGGTCATGGAATTGGGTCCTATCTCAATGTTCACGAAGGACCTCATCTGATCAGTTTCAGGCCACAGGCTCGAAATGTACCGTTGCAATCTTCCATGACTGTTACAGATGAACCTGGTTACTACGAGGATGGAGAGTTTGGAATAAGATTGGAGAATGTGCTTATTGTCAAAGAGGCTGACACAAAATTCAATTTTGGTGATAAAGGTTACTTATCTTTTGAGCACATTACCTGGGCACCATATCAAACGAAGTTGATTGACCTGAAACTTTTAAGTCCTGACGAGATTAATTGGGTGAACTCCTATCACTCTACATGTAGAGATATTCTAGCGCCTTATTTGGATGAAGTTGAAAATGCTTGGCTGAAGAAAGCTACTGAACCAATAGGTGCATGA 1923 0.4269 MEDTLSGLRSLMATHSPPLDALVVPSEDYHQSEYVSARDKRREFVSGFTGSAGLALVTKNEALLWTDGRYFLQASQELSAQWKLMRIGEDPAVDIWIADNLPKDAFIGVDPWCISIDTAQRWERAFSEKQQKLVQTTKNLIDEVWINRPQEEINAVIVQPLKFAGRSVADKLKDLRKRLLQEQARGIIFTALDEVAWLYNIRGSDVAYCPVVHAFAIVTANSAFLYVDKRKVSVEVQAHLVENEIEIRDYTAVSSDVTLLATDDLDTVSTVKRVNGGHQAEENSNNLIWADPGSCCYALYAKLNPDTVLLQQSPLALAKALKNSVELDGLKKAHIRDGAAVVQYLVWLDKKMQDVYGASGYFLEKESAKKEKQLQSLKLTEVTVSDQLESFRASKENFKGLSFPTISSVGSNAAIIHYSPKAEACAELDPDKIYLFDSGAQYLDGTTDITRTVHFGKPSTHEKACYTAVLKGHIALGNARFPNGTNGHALDILARIPLWKDGLDYRHGTGHGIGSYLNVHEGPHLISFRPQARNVPLQSSMTVTDEPGYYEDGEFGIRLENVLIVKEADTKFNFGDKGYLSFEHITWAPYQTKLIDLKLLSPDEINWVNSYHSTCRDILAPYLDEVENAWLKKATEPIGA* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0657 640 Pfam Creatinase/Prolidase N-terminal domain 6 143 IPR000587 GO:0016787
Vra11g0657 640 Gene3D Creatinase/methionine aminopeptidase superfamily 320 638 IPR036005 -
Vra11g0657 640 PANTHER AMINOPEPTIDASE P1 2 638 - -
Vra11g0657 640 SUPERFAMILY Creatinase/aminopeptidase 323 604 IPR036005 -
Vra11g0657 640 Gene3D - 1 145 IPR029149 -
Vra11g0657 640 Pfam C-terminal region of peptidase_M24 579 638 IPR032416 -
Vra11g0657 640 Gene3D - 146 318 IPR029149 -
Vra11g0657 640 ProSitePatterns Aminopeptidase P and proline dipeptidase signature. 507 519 IPR001131 -
Vra11g0657 640 SUPERFAMILY Creatinase/prolidase N-terminal domain 41 132 IPR029149 -
Vra11g0657 640 PANTHER XAA-PRO AMINOPEPTIDASE 1 2 638 - -
Vra11g0657 640 Pfam Metallopeptidase family M24 331 567 IPR000994 -
Vra11g0657 640 Pfam Creatinase/Prolidase N-terminal domain 147 326 - -
Vra11g0657 640 CDD APP 329 575 IPR033740 GO:0070006
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0657 Vra-Chr11 5257020 5264685 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0657 K01262 - gmx:100803268 1171.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0657 11 5257020 5264685 Vra11g0657 11 5257020 5264685 ECH