Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0656 ATGACAACATCGAAACCACATGCAATTCTTCTGACAAGTCCCGGCATGGGACACATAATTCCGATGGTGGAGCTAGGGAAGCGCCTCCTCACACACCACTCCTTCCACGTCACCATCTTCGTCGTCACCACCGATTCCGCAACCACAACCTCTCAGATTCTCCAACAAACATCAAACCTTAGTTCCCTCAACATCGTCCATGTTCCTCCCATCGACGTCTCCAACAAACTACCACCCAATCCTCCCTTAGAAGTACGAATCAACTTAACTATGCTTGAGTCCCTTCCATTTCTACGTTCCTCCCTCACATCCATTAACAATTTTCCTCCTCCTTCAGCTCTTATCGTCGACTTGTTTGGTCTTCAAGCTTTGCCCATGGCACGTGACCTCGGCATGCTAACCTACGTTTACTTCGCCACCAGCGCTTGGTTCTCTGCCGTTACAGTTTACTTTTCGGACACGGACAAGAAAATTATGGAAAGACACGCTGAAAGCCGCGAGCCACTTTCGATTCCCGGCTGCACACCGCTCCGGTTCGAGGACACGCTCGAACCGTTTTTATCTCCGGGAGGGGCGATGTACGAGGGTTACCATGTAGCGGCAAAGGAGATCGTAGCCGCTGATGGAATTTTGATGAACACGTGGCAAGATCTGGAGCCCGTTGCGACGAAGGCGCTGACAGAGGATGGGATTTTGGGACGGTTTACGAAGGGAGAGGTGTACGCGGTTGGACCGTTGGTGAGAAGCATGGAGAAGAAACCGGAGGGTGGAAAGAAGGGTGGGGTTTTGCTATGGCTGGACGAGCAACCGGCGGATTCGGTGGTCTACGTGTCGTTCGGGAGCGGTGGGACAATGTCGGGGAACCAACTGAGGGAGGTGGCGTTGGGGTTAGAGCTGAGCCAGCAGAGGTTTGTTTGGGTGGTGCGGCCACCTTGCGAAGGTGACGCGAGTGGCGCGTTTTTCGACGTGACGAGAGGCGGTGACGCTGCAATGAGTTACTTGCCGGAAGGGTTTCTGAAAAGGACGGAGGGGGTGGGGGTTGTGGTCCCTATGTGGGCCCCGCAGGCAGAGATCCTGGAACATCCTGCGACGGGGGGTTTCGTGACGCACTGCGGTTGGAATTCCGTTTTGGAGAGCGTGGAGAACGGCGTTCCCATGGTGGCGTGGCCCCTTTACGCTGAGCAGAAGATGAATGCTTTCATGCTGTCGGAAGAGCTCGGGGTGGCGGTGCGAGTGGCGGAGGAGGGCGGAGGAGTTGTGGGAAGGGAACAGGTAGCGGAGGTGGTGAGAAGAGTGATGGTGGATAAAGAAGGTGTTGGCATGAGGAAGAAAGTGAAGGTGCTGAAACTGAGCGGAGAAAAAGCTTTGTGTATGTTTGGTTCTTCTCATCATTCGCTTTCTAAAATGAGGAAAGAGTGTGAAGTTCATCTTCAAGCTTCTGATGCAAAACTTCCCCCAGCCTGCCACTTACGGGGTACCACCACTGATGTCTTCAACCACGTCGTTTACTCTTGA 1515 0.5373 MTTSKPHAILLTSPGMGHIIPMVELGKRLLTHHSFHVTIFVVTTDSATTTSQILQQTSNLSSLNIVHVPPIDVSNKLPPNPPLEVRINLTMLESLPFLRSSLTSINNFPPPSALIVDLFGLQALPMARDLGMLTYVYFATSAWFSAVTVYFSDTDKKIMERHAESREPLSIPGCTPLRFEDTLEPFLSPGGAMYEGYHVAAKEIVAADGILMNTWQDLEPVATKALTEDGILGRFTKGEVYAVGPLVRSMEKKPEGGKKGGVLLWLDEQPADSVVYVSFGSGGTMSGNQLREVALGLELSQQRFVWVVRPPCEGDASGAFFDVTRGGDAAMSYLPEGFLKRTEGVGVVVPMWAPQAEILEHPATGGFVTHCGWNSVLESVENGVPMVAWPLYAEQKMNAFMLSEELGVAVRVAEEGGGVVGREQVAEVVRRVMVDKEGVGMRKKVKVLKLSGEKALCMFGSSHHSLSKMRKECEVHLQASDAKLPPACHLRGTTTDVFNHVVYS* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0656 504 Gene3D Glycogen Phosphorylase B; 7 462 - -
Vra11g0656 504 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 271 435 IPR002213 GO:0008194
Vra11g0656 504 CDD GT1_Gtf-like 6 452 IPR002213 GO:0008194
Vra11g0656 504 PANTHER GLYCOSYLTRANSFERASE 3 475 - -
Vra11g0656 504 PANTHER UDP-GLYCOSYLTRANSFERASE 72C1 3 475 - -
Vra11g0656 504 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 5 466 - -
Vra11g0656 504 ProSitePatterns UDP-glycosyltransferases signature. 352 395 IPR035595 -
Vra11g0656 504 Gene3D Glycogen Phosphorylase B; 260 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0656 Vra-Chr11 5248486 5250312 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0656 1 478 Glycosyltransferase AT5G66690 47.303 1.22e-155 450
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0656 K12356 - gmx:100781979 712.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0656 11 5248486 5250312 Vra11g0656 11 5248486 5250312 ECH