Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0653 ATGCGACTGAGTCCTACTCCAAGGCATAACCCTTTCTTCCAACCAAATCTCCGATTCTCAGTCTCTCGTTCTCAAACAATGAAAACAAGACAGATCTTTGGTGTCTCTCTCTCCCTCATTCTTATCAACCTTGCTGCTGTAATGGAGCGGGCGGATGAAAACCTTCTTCCATCTGTCTATAAAGAAGTTAGTGAAGCATTTAATGCCGGGCCATCTGACTTGGGTTACCTGACATTCATAAGAAACTTTGTTCAGGGACTGTCTTCTCCTTTGGCTGGTATACTCGTTATCAACTACGATCGCCCAACTGTTCTTGCTATGGGCACTTTCTGCTGGGCGTTATCTACAGCTGCTGTGGGTGTTTGCCACAATTTTCTGCAGGTTGCATTCTGGAGAGCAATAAACGGCTTTGGTTTGGCAATAGTGATTCCAGCACTCCAGTCTTTCATTGCTGATAGCTACAGGGATGGAGTGAGAGGAACTGGGTTTGGATTGCTGAGTCTCATTGGTAACTTAGGAGGCATAGGAGGTGGTGTTCTGGCTACTGTCATGGCTGGAAAACAGTTTTGGGGCATAGAAGGATGGCGATGTGCATTCGTTTTGATGGCAACTTCGAGTGCATTAATTGGATTTCTTGTTTTACTGTACGTTGTTGACCCAAGAAAAAGATTTCCTAGCACTCGAGATGCTAGTGAGACTTCAGACAGAGATGACTCTATCTATAAAGGCAATGCTAGTGCAGCACCAATCTGGAAGGACTCTTGGGCAGCCACGAAAGCTGTGATAAAGGTGAAAACATTTCAAATAATCGTCTTACAGGGCATTATTGGGTCACTGCCGTGGACTGCCATGGTGTTCTTCACAATGTGGTTCGAACTTATTGGTTTTGATAACAATACTTCGGCAACCCTCCTTGGCCTTTTTGCAATTGGATGTGCCATGGGATCTTTGATAGGTGGATCAATAGCTGATCAATTATCAAAAGTCTACCCTCATTCTGCTCGGACCATGTGCGCACAGTTCAGTGCCTTTATGGGCATTCCATTCTCATGGATTCTTCTCAGGGTGATTCCTCAGTCAGTAAGTAGTTTTCTTACCTTTTCTGTGACCCTCTTTATGATGGGTCTAACAATCAGCTGGAACGGTACGGCTGCAAATGCTCCTATGTTTGCTGAGGTAGTTCCTGTCAAGCACCGTACCATGATTTATGCATTTGATCGAGCTTTTGAAGTCTCGTTTTCTTCTATAGCCGCTCCGCTGGTGGGGATTCTTTCTGAGAAAATGTTTGGCTATAACTCAAAGTCCGTTGATCCCGTCAAAGGATCTTCAGCCGAGGCTCTTGCCTTGTCAAAGGGCATTCTTTCTATGATGGCTGTTCCATTTGGTTTGTGTTGTTTATGCTACACCCCTCTATATTACATATTTAAGCAGGACCGTGAAAATGCTAGAATGCTTTCTGTAAAAGAGGAGGAGATGATGTGA 1482 0.4447 MRLSPTPRHNPFFQPNLRFSVSRSQTMKTRQIFGVSLSLILINLAAVMERADENLLPSVYKEVSEAFNAGPSDLGYLTFIRNFVQGLSSPLAGILVINYDRPTVLAMGTFCWALSTAAVGVCHNFLQVAFWRAINGFGLAIVIPALQSFIADSYRDGVRGTGFGLLSLIGNLGGIGGGVLATVMAGKQFWGIEGWRCAFVLMATSSALIGFLVLLYVVDPRKRFPSTRDASETSDRDDSIYKGNASAAPIWKDSWAATKAVIKVKTFQIIVLQGIIGSLPWTAMVFFTMWFELIGFDNNTSATLLGLFAIGCAMGSLIGGSIADQLSKVYPHSARTMCAQFSAFMGIPFSWILLRVIPQSVSSFLTFSVTLFMMGLTISWNGTAANAPMFAEVVPVKHRTMIYAFDRAFEVSFSSIAAPLVGILSEKMFGYNSKSVDPVKGSSAEALALSKGILSMMAVPFGLCCLCYTPLYYIFKQDRENARMLSVKEEEMM* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0653 493 SUPERFAMILY MFS general substrate transporter 36 479 IPR036259 -
Vra11g0653 493 PANTHER SPINSTER 28 493 IPR044770 -
Vra11g0653 493 Pfam Major Facilitator Superfamily 44 374 IPR011701 GO:0022857|GO:0055085
Vra11g0653 493 Gene3D MFS general substrate transporter like domains 30 227 IPR036259 -
Vra11g0653 493 Gene3D MFS general substrate transporter like domains 263 491 IPR036259 -
Vra11g0653 493 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 28 493 - -
Vra11g0653 493 CDD MFS_spinster_like 39 468 IPR044770 -
Vra11g0653 493 ProSiteProfiles Major facilitator superfamily (MFS) profile. 38 479 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0653 Vra-Chr11 5222098 5226611 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0653 - - gmx:100812646 870.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0653 11 5222098 5226611 Vra11g0653 11 5222098 5226611 ECH