Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0650 ATGATGGGAGGTCAAACAAGTAAGATACCTAGTAGTAGTGATGTTCCAACGCCCATAAAAATGGGTAGCCATTCTCTCTATGCGGATGATTTAAGTTCTTATGAAGCGGCATGTGTTGAAGATCCAAACTTGCAATCCCTTGATGCTACCATTCAGGAGCGCACCAACAAGGTGATAACCTCTCTTGCCAGTGGGATTGAGGTTCGTTCCATATCCATCGAGTCACTGGGGGAAGTGACTGGTAGTTTGCTTGATATGAATCGGGATGTTGCCAAAGTCATTCTAGAATGCAAGCAAGATATATTGAATAAGAAGGACAAGGAGTTGTTCTCCTTGGTGGGGGAATTCTTTGAAAATAGCCTTCAGACATTGAAATTCTGCAATAATCTTGACAAATGCTTGAATCGAGCACGCGAAAGGCATGTTATAGTTAAGTCTGCAATTACCTATTTTGAGGAAGAGGTGCAAAATGGGGTTGAAGGGTCTACTTATTTGAAGACATTGCAAGAGCTTAGGGGTTTCAAGGAAGCTGGAGACCCTTTCACAGAAGAATTTTATTCCTTGTTTCAATCAGTTTATCAAAAGCAAGCATCAATGCTGAAGAAACTGCAGATCAGAAAGCAAAAGCTTGATAAGAAATTGAAGTCCCTCAAGACACTGAAGAGGGTCTCAAATGCTATTTTCGTTGCTGCTTTCGTGTCTGTATTGATTTTCTCAGTGGTGGCAGCTGCAATTGCTGCACCACCTGTTGTAACTGCTTTGGCTGGTGCTTTGGCTGTTCCGGTAGGCTCAGTGGGGAAATGGTGTGACTCACTTTTTAAGCGATATGAGACAGCTCTGAAGAGCCAAAGAGATTTAATCAGTTCTATGCACGCTGGTAGTTACATTACATTGGTAGACTTGAACAACATTCGGGTGCTCATTGACCAATTAGAAATAAAGATTGAATCCATGTTGCAGAGTGCTGATTTTGCTCTGAGAAATGAGGAAGGTGTAAGGTTTGCGATTGATGAGATTAAGAAGAATATAGACACTTTTGCAGAGACTATTGAGGCTTTGAGTAAGCAAGCTGACGAATGTAGTCGCCAGATAAGGAGAGCAAGGTCAGTGGTTGTGAAAAAGTTTATTAATTACTCTGGTTGA 1143 0.4156 MMGGQTSKIPSSSDVPTPIKMGSHSLYADDLSSYEAACVEDPNLQSLDATIQERTNKVITSLASGIEVRSISIESLGEVTGSLLDMNRDVAKVILECKQDILNKKDKELFSLVGEFFENSLQTLKFCNNLDKCLNRARERHVIVKSAITYFEEEVQNGVEGSTYLKTLQELRGFKEAGDPFTEEFYSLFQSVYQKQASMLKKLQIRKQKLDKKLKSLKTLKRVSNAIFVAAFVSVLIFSVVAAAIAAPPVVTALAGALAVPVGSVGKWCDSLFKRYETALKSQRDLISSMHAGSYITLVDLNNIRVLIDQLEIKIESMLQSADFALRNEEGVRFAIDEIKKNIDTFAETIEALSKQADECSRQIRRARSVVVKKFINYSG* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0650 380 Pfam Protein of unknown function (DUF677) 44 374 IPR007749 -
Vra11g0650 380 Gene3D - 88 371 - -
Vra11g0650 380 PANTHER UPF0496 PROTEIN 3-RELATED 2 378 IPR007749 -
Vra11g0650 380 Coils Coil 193 220 - -
Vra11g0650 380 PANTHER UPF0496 PLANT-LIKE PROTEIN 2 378 - -
Vra11g0650 380 Coils Coil 336 370 - -
Vra11g0650 380 Coils Coil 301 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0650 Vra-Chr11 5201947 5204005 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0650 - - gmx:100819451 591.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0650 11 5201947 5204005 Vra11g0650 11 5201947 5204005 ECH