Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0637 ATGGGGGATATCAGGATTACCCGGGTAGAGCAAAGTCAAACAAAGATTAAAAATGTTCCAATTGCTGTCACCCCTGAAGGATTTTGGTGTTGCCCTACTCCTGTTGGGTTCCAGAAAAGCCTCAAGCCTCAAAACCCTTTGAATAAACTCAAACCCTCCCCACCAGCTCCGAAGACCAGTTCCCAGAAAAAGGAAGTCTCGGTGAGTGAGAGAAAAGCAGGGCCTGCCCCGTCAAGGTTGGTGGTTTCTGATGCTCAACAATGTATTGATGATCCAGAAAGACCTCCACCTAGCCCTTCTGTGCCTGCACAGAGAGCACCTAGACCCAAACTTGAATCTATGCCAAAAAAAGTGGCTATTGAGTTTGGTGAACCTGGAACTTGTGACATTAAGCTTCTTCTCCTTGGAAAGCAGGGTTTTTGTGTGAAGTTAAGTGTTCACAAGGATGTTTTAAAAGAGAAGAGTAGTTTTTTTGCTGATAAACTTTCTGAACAATCTGGTTTGTCATGTCTCCAAGTTGATGACTGTGAGGATGTTGAAATATATGTTGAAACTGTTGGGCTTATGTACTGCAAAGAAATGAAGCAGCGGCTAATGAAGCAAAGCGTTTCTCGCATTCTTAGAATACTTAAGGTTGCAGAATTCCTAGGCTTCAGCTCATGTATCCAATCATGTTTGGAGTACTTGGAAGCAGTCCCTTGGAATGGAGAGGAAGAAGAAGAAAAGGTGATTTCAACAGTTCTACGACTCCAAGGAGATGGAATCGGGGTCAATCCGGTGCTAAAACGAGTTTCTCCCGATACTTCCAATGCCCCAAAAGATACCCTCTCCCACATCGTTGAACTTGTTCTGAAATCCAATGAGGAGAGAGGTCGCCGGGAGATGAAATCCATTGTTCTAAAGCTGCTTAGGGAGAACAATAGTCTTCCAAGTTCTGCAGGTTCAGTGGACATCTGTAATGACATGATTTATAAGTCATGCAGAAGCTGTTTGGATTCATTATTGTGTCTGTTCAACCAAGCTGCAGAACCAGAGTTCAAAGACATGCCTAGCGATAACAAAGAACCTGTAGTAAAACATATAGGTCTTGAAGCTGATAACTTGTCATGGTTGCTGGAGATTTTAATCGATAAACAAGCTGCTGAAAATTTTACGGTGATGTGGGCAAACCATCAGGAATTGGCAGCCCTACATGGAAAGCTTCCCATTGCGTTTCGGTATCATGTAAGCTGCATTTCTGGAAGACTGTATGTGAGCATAGGAAGAGGGGAGGTTTTGCCATCGAAGAACACACGGCAGTTGTTGTTGCAGACATGGCTGCAGCCTCTAATCAACGACTACAACTGGTTGCAGCACGGGTGCAGGACATTTGACAGGAAACTTGTGGAGGAAGGAATTGGAAGAACAATTCTGACCTTGCCTTTGGAGGATCAACAGAGTATTTTGCTTTCTTGGGTTGGAAGCTTCTTGAAAACTGGTGATGGTTGTCCCAATCTTCAGAGAGCTTTTGAGGTGTGGTGGCGGAGGACTTTCATAAGACCCTATGTGGAAGCCATGCCAGATGCTTGA 1569 0.4423 MGDIRITRVEQSQTKIKNVPIAVTPEGFWCCPTPVGFQKSLKPQNPLNKLKPSPPAPKTSSQKKEVSVSERKAGPAPSRLVVSDAQQCIDDPERPPPSPSVPAQRAPRPKLESMPKKVAIEFGEPGTCDIKLLLLGKQGFCVKLSVHKDVLKEKSSFFADKLSEQSGLSCLQVDDCEDVEIYVETVGLMYCKEMKQRLMKQSVSRILRILKVAEFLGFSSCIQSCLEYLEAVPWNGEEEEEKVISTVLRLQGDGIGVNPVLKRVSPDTSNAPKDTLSHIVELVLKSNEERGRREMKSIVLKLLRENNSLPSSAGSVDICNDMIYKSCRSCLDSLLCLFNQAAEPEFKDMPSDNKEPVVKHIGLEADNLSWLLEILIDKQAAENFTVMWANHQELAALHGKLPIAFRYHVSCISGRLYVSIGRGEVLPSKNTRQLLLQTWLQPLINDYNWLQHGCRTFDRKLVEEGIGRTILTLPLEDQQSILLSWVGSFLKTGDGCPNLQRAFEVWWRRTFIRPYVEAMPDA* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0637 522 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 1 518 IPR038920 -
Vra11g0637 522 MobiDBLite consensus disorder prediction 41 112 - -
Vra11g0637 522 PANTHER BTB/POZ DOMAIN PROTEIN 1 518 - -
Vra11g0637 522 SUPERFAMILY POZ domain 125 229 IPR011333 -
Vra11g0637 522 Gene3D Potassium Channel Kv1.1; Chain A 122 249 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0637 Vra-Chr11 5051466 5055443 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0637 - - gmx:100818853 944.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0637 11 5051466 5055443 Vra11g0637 11 5051466 5055443 ECH
Vra11g0637 11 5051466 5055443 Vra7g1087 7 26571379 26575691 PCT