Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0474 ATGGCGGAGTTGTTAGCAACATTAGGGGATCTGGAGAGGGACTCATTCGTGCCTCTTCTCTCCAAGCTGATTGGGGAATCAAAGCACGTGCAGAACAACCCACCGGAGCTCGTTCCCGAAGAGGACAGAGTCGTGAAACACGTGTTGGACGTTCTATTGCCCTTCAGCACCACCACCGGCGGCGGTCCCTTGCTCCTCAACCACGTCACCTACACTCCCGGACGGGGGAACCTCATCGTCGAGTACCCCGGCACCGTTCCCGGCAAAATCCTCTCCTTCGTCGGTTGCCACATGGACGTCGTCACAGCCAATCCCAACGATTGGGATTTTGATCCGTTTTCACTGAGCATTGATGGGGATAAGCTTCGGGGTCGTGGAACTACTGATTGTCTGGGTCACGTGGCACTTGTCGCGGAACTCATGAAAAAGCTCGGGCAGACCAAGCCGAATTTGAAATCAACTGTTGTTGCTGTTTTTATAGCCAACGAAGAGAATTCTTCAATTACTGGTATTGGTGTGGATGCGCTTGTCAAAGACGGTCTTCTCAATAAGCTGAAGAATGGCCCTCTGTACTGGATTGACACGGCAGATAAACAACCATGTGTAGGGACTGGTGGTATGATACCTTGGAAACTTCAGGTCACGGGGAAGCTCTTTCACAGTGGATTAGCTCATAAAGCTATTAATGCATTGGAGCTAGGCATGGATGCTCTAAAGGAAATCCAGTCCCGATTTTACCGAGACTTCCCACCTCATCCTCAGGAACAGGTTTACGGGTTTGCAACTCCATCAACCATGAAACCAACCCAATGGAGCTATCCAGGAGGTGGAATCAATCAAATTCCAGGGGAATGTACTATTTCAGGAGATGTCAGATTGACTCCATTCTACAATGTAAAGGATGTAATGAAGAAGCTGCAAGAATACGTGGACGACATTAATAAGAATATTCAGAAGCTAGAAAGTAGAGGTCCAGTTTCAAAATATGTCCTACCCGATGAAAACATAAGAGGAAGCCTTACTTTAACTTTTAACGAGGCACTGTCTGGAGTTGCTTGTGATCTTAATTCTAAAGGTTTCCATGTTTTATGCAAAGCAACTGAAGAAGTAGTTGGGTACGTAAAGCCTTACTCGATTACTGGGAGTTTGCCTCTCATTCGGGAACTACAGGAAGAAGGTTTTGATGTCCAAACATCTGGCTACGGCCTAATGGCTACTTACCATGCTGCGAACGAGTACTGCCTTTTCACGGATATGTCCCAAGGATATCGGGTCTTTGCCAGAATCATCTCTCAACTGGAAGATTGA 1308 0.4725 MAELLATLGDLERDSFVPLLSKLIGESKHVQNNPPELVPEEDRVVKHVLDVLLPFSTTTGGGPLLLNHVTYTPGRGNLIVEYPGTVPGKILSFVGCHMDVVTANPNDWDFDPFSLSIDGDKLRGRGTTDCLGHVALVAELMKKLGQTKPNLKSTVVAVFIANEENSSITGIGVDALVKDGLLNKLKNGPLYWIDTADKQPCVGTGGMIPWKLQVTGKLFHSGLAHKAINALELGMDALKEIQSRFYRDFPPHPQEQVYGFATPSTMKPTQWSYPGGGINQIPGECTISGDVRLTPFYNVKDVMKKLQEYVDDINKNIQKLESRGPVSKYVLPDENIRGSLTLTFNEALSGVACDLNSKGFHVLCKATEEVVGYVKPYSITGSLPLIRELQEEGFDVQTSGYGLMATYHAANEYCLFTDMSQGYRVFARIISQLED* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0474 435 PANTHER ACETYLORNITHINE DEACETYLASE 7 435 - -
Vra11g0474 435 Pfam Peptidase dimerisation domain 203 316 IPR011650 -
Vra11g0474 435 SUPERFAMILY Zn-dependent exopeptidases 10 433 - -
Vra11g0474 435 Coils Coil 303 323 - -
Vra11g0474 435 Gene3D Zn peptidases 7 191 - -
Vra11g0474 435 Pfam Peptidase family M20/M25/M40 94 431 IPR002933 GO:0016787
Vra11g0474 435 SUPERFAMILY Bacterial exopeptidase dimerisation domain 206 316 IPR036264 -
Vra11g0474 435 CDD M20_ArgE-related 11 433 - -
Vra11g0474 435 PANTHER - 7 435 - -
Vra11g0474 435 Gene3D - 206 322 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0474 K01438 - gmx:100814676 830.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0474 11 3518254 3522596 Vra11g0474 11 3518254 3522596 ECH