Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0458 ATGCTGCCAGTAATACTGAAATGTAAAAGAGAAAATGGCTATTTCCTAACACCACGCGCCAATGGAACCTGGTTGGTGGGAACTGCAACCAATAAAATAAAGAGAGTTGTTTATTTTTTTTCTGCAACCAAAAGCAGGTCATCTTCATCTTCATCTTCATTTCAATTTCAATCAATAATCATGGCAACCATTCATCTTTCTTCTGCAACTTCCTTGCTCTTCCAATCCGAACTCTCTCCCTCCAAACGCAGAACCAAACGCATCCCTAAAATCACCATTGTAGCAAACCACGCCCAACCGATCCAAATTAGCTCCTCCAACGGCTCTCCCTCCGTCGGCAACGCAAACTCTTCGGTTCAGGTGAGTGATCATGGCGTGGGACACGCAGGACCGAATTCCGAGGCGCGTAGGAAAACTAAGATCGTGTGCACGATAGGTCCATCCACGAGCTCACGTGACATGATATGGAGCCTGGCTGAAGCCGGAATGAACGTGGCGCGTTTGAACATGTCGCACGGGGACCACGCCTCGCACCTGCAGACTATTGAATTGGTGAGAGAGTACAATGCTCAGTTTCAGGATAAGGTCGTAGCCATCATGCTCGACACCAAGGGTCCTGAAGTTAGAAGCGGGGATGTGCCTCAACCAATTTCACTTAAAGAGGGGCAAGAATTTTATTTCACCACCAGGAGAGGGGTCAGCACGGAAAGCACAGTTAGCGTGAATTATGATGATTTTGTGAATGATGTGGAGGTTGGAGATGTGTTATTGGTTGATGGAGGAATGATGTCTCTTGCTGTAAAGTCAAAGACAAAAGACTTGGTTAAATGTGAGGTAATTGATGGTGGTGAACTGAAATCTAGGCGTCATTTAAATGTCCGTGGAAAAAGTGCTACACTTCCTTCCATAACTGACAAGGACTGGGAAGATATCAAGTTTGGGGTGGACAATCAAGTAGACTTCTATGCTGTGTCATTTGTCAAGGATGCTAGAGTGGTGCACGAGTTAAAAGAGTACCTCAAAAGTCATAATGCTGATATACACGTGATTGTAAAAATTGAAAGTGCAGATTCCATACCAAATCTTCATTCCATACTTTCTGCTTCAGATGGGGCCATGGTTGCTCGTGGGGATCTTGGAGCTGAACTTCCAATAGAGGAAGTTCCTTTATTGCAGGAGGACATCATAAGGAGATGTCAAAGCATGCAAAAGCCAGTTATTGTGGCAACAAATATGCTTGAAAGCATGATTAATCATCCCACGCCCACAAGGGCAGAAGTCTCGGACATTGCAATTGCAGTAAGACAAGGTGCTGATGCTATCATGCTTTCAGGAGAAACTGCACACGGAAAATTTCCATTGAAAGCTGTTAAAGTTATGCACACAGTGGCTCTTAGGAACGAATCCAGTGTTCAAAGTGGTGCTGCTTGTCCAAGTCTGAGTTCCCATAAAAGCCACATGGGAGAAATGTTTGCTTTCCATGCGACAACAATGTCTAACACTCTTAACACTCCCATTATTGTTTTCACCAGAACAGGGTCCATGGCTATTCTATTGAGCCATTATAGGCCTTACTCAACAATCTTTGCATTCACAAATGAAACAAGGATTAAGCAGAGGTTGGCACTTTATCATGGCGTTGTGCCTATATACATGCAATTTTCAAATGATGCAGAGGAGACTTTCTCTAGAGCCCTCGAGCTACTATTGAGTAAGGGTCATGTACACCAGGAACAGCATGTTACACTTGTTCAAAGTGGAGCACAACCAATATGGCGTGAGGAATCCACTCACCACATACAAGTTCGTAAGGTTCATGAATAA 1824 0.4413 MLPVILKCKRENGYFLTPRANGTWLVGTATNKIKRVVYFFSATKSRSSSSSSSFQFQSIIMATIHLSSATSLLFQSELSPSKRRTKRIPKITIVANHAQPIQISSSNGSPSVGNANSSVQVSDHGVGHAGPNSEARRKTKIVCTIGPSTSSRDMIWSLAEAGMNVARLNMSHGDHASHLQTIELVREYNAQFQDKVVAIMLDTKGPEVRSGDVPQPISLKEGQEFYFTTRRGVSTESTVSVNYDDFVNDVEVGDVLLVDGGMMSLAVKSKTKDLVKCEVIDGGELKSRRHLNVRGKSATLPSITDKDWEDIKFGVDNQVDFYAVSFVKDARVVHELKEYLKSHNADIHVIVKIESADSIPNLHSILSASDGAMVARGDLGAELPIEEVPLLQEDIIRRCQSMQKPVIVATNMLESMINHPTPTRAEVSDIAIAVRQGADAIMLSGETAHGKFPLKAVKVMHTVALRNESSVQSGAACPSLSSHKSHMGEMFAFHATTMSNTLNTPIIVFTRTGSMAILLSHYRPYSTIFAFTNETRIKQRLALYHGVVPIYMQFSNDAEETFSRALELLLSKGHVHQEQHVTLVQSGAQPIWREESTHHIQVRKVHE* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0458 607 Gene3D - 468 585 IPR036918 -
Vra11g0458 607 TIGRFAM pyruv_kin: pyruvate kinase 137 605 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Vra11g0458 607 MobiDBLite consensus disorder prediction 104 135 - -
Vra11g0458 607 SUPERFAMILY PK beta-barrel domain-like 206 297 IPR011037 -
Vra11g0458 607 PANTHER PLASTIDIAL PYRUVATE KINASE 3, CHLOROPLASTIC 104 606 - -
Vra11g0458 607 Pfam Pyruvate kinase, alpha/beta domain 496 585 IPR015795 -
Vra11g0458 607 MobiDBLite consensus disorder prediction 104 123 - -
Vra11g0458 607 SUPERFAMILY PK C-terminal domain-like 455 605 IPR036918 -
Vra11g0458 607 ProSitePatterns Pyruvate kinase active site signature. 347 359 IPR018209 GO:0004743|GO:0006096
Vra11g0458 607 Pfam Pyruvate kinase, barrel domain 137 473 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Vra11g0458 607 Gene3D - 137 467 IPR040442 -
Vra11g0458 607 Gene3D - 206 301 IPR015806 GO:0004743|GO:0006096
Vra11g0458 607 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 135 470 IPR015813 GO:0003824
Vra11g0458 607 PRINTS Pyruvate kinase family signature 195 211 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Vra11g0458 607 PRINTS Pyruvate kinase family signature 319 333 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Vra11g0458 607 PRINTS Pyruvate kinase family signature 349 375 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Vra11g0458 607 PRINTS Pyruvate kinase family signature 376 400 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Vra11g0458 607 PRINTS Pyruvate kinase family signature 401 425 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Vra11g0458 607 PRINTS Pyruvate kinase family signature 426 444 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Vra11g0458 607 PRINTS Pyruvate kinase family signature 445 461 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Vra11g0458 607 PANTHER PYRUVATE KINASE 104 606 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0458 Vra-Chr11 3375772 3386834 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0458 K00873 - gmx:100776984 908.672