Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0444 ATGTCAAGAACAGTGGAAGTAACAGTTTTATCCGCCGAGAATCTCCAAATGAACAAAAAACCCGTAAGAGGAAACACATTTGTGACGGTTCACTCCGACGCCGGCAGCGACGCAGGTGCTGTCACGAAAGTGGATTCAGAGGGTGGAAGCTACCCTTCGTGGAATGACAAGGTTGTGGTGAACGTGCCGTTGCATGCAAGGTTCATAACGGTGGAGGTGAAGTCCAAAACGACGTCGTCGTCGTCGTTGACGGGGTCTAACAGTGTCGGCGTTGCACGAATACCGGTTTCTGATTTCATTGGAGGGTACGTGCCAGAAAATCAGCTGCATTTCTTGAGCTACAGGTTGTGGGACGGTAACGTTAAGAGAAATGGGGTTATAAATATTTCGGTGAGGGTGAAACTATCGGAACGTTCCTCTTGTAGTTCCAATTCTTTGCCATTTGCGGCGGTAACTGGGGTGCCGGTGGCCGGTAATGGCTCCACCGGAGTTGTCACAGGGATTCCAGCTCTTTGGTTAAACTACCAAAGAAATCTCTGA 540 0.4944 MSRTVEVTVLSAENLQMNKKPVRGNTFVTVHSDAGSDAGAVTKVDSEGGSYPSWNDKVVVNVPLHARFITVEVKSKTTSSSSLTGSNSVGVARIPVSDFIGGYVPENQLHFLSYRLWDGNVKRNGVINISVRVKLSERSSCSSNSLPFAAVTGVPVAGNGSTGVVTGIPALWLNYQRNL* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0444 179 PANTHER INGRESSION PROTEIN FIC1 4 169 - -
Vra11g0444 179 CDD C2_SRC2_like 4 129 IPR044750 GO:0006952
Vra11g0444 179 Gene3D C2 domain 3 134 IPR035892 -
Vra11g0444 179 Pfam C2 domain 4 104 IPR000008 -
Vra11g0444 179 SMART C2_3c 4 108 IPR000008 -
Vra11g0444 179 ProSiteProfiles C2 domain profile. 1 110 IPR000008 -
Vra11g0444 179 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 133 IPR035892 -
Vra11g0444 179 PANTHER - 4 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0444 Vra-Chr11 3291173 3291859 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0444 - - gmx:100500298 278.485