Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0441 ATGGTTAGCTCTTCCGCAATGAACGACGAACAACAGTCTCTGCTTCTCAGCTCTTCTTCTCGCTTCTCGCCTCCTCAAGGAGTGAAGCTATCGTACGGCACCGCCGGCTTCAGGGCCGATGCGTCACTTCTCCCATCGACGGTCTACAGAGTGGGAATCCTAGCAGCTCTTAGATCGCTCAAGACCGGTTCCATCATCGGTCTCATGATCACTGCCTCACACAACAAAGTTTCTGATAATGGAGTCAAAATAGCTGACCCTAATGGTGGCATGCTCTCGCAGCATTGGGAACCCTTCGCCGACGCCCTCGCCAATGCTCCTTCTCCCCAACACCTCCTTCTGTTGATCAATGAATTCGTGGCGAAAGAAGGGATCTTGATGGATGGGGTCAGCCAGGCAGAAGTGCTTTTGGGGAGAGACACTAGGCCTAGTGGAGATGCTTTGTTTGAAGCAGCTAGACAGGGGGTCACTTCAGTTGTCGGAGCTGTTGCGACGGACATGGGGATCTTGACAACTCCACAATTGCACTGGATGGTTCGGGCCCGAAATAAGGGCATGCAAGTTTCAGAGCAGGATTACTTTGAACAGCTTTCAAGCTCATTCAGGTACTTGGAGGATTTGATCCCTGCTGAAAAAAGTAAGTTTGATGGACTGAACAATAAAGTGATTGTGGATGGATCCAATGGAGTTGGTGGAGTGAAACTTAAAGTTTTAGGGAGTTTGTTGAATGCTTTGGTTATTGAGGTTCGGAACAGCAGTGAAGATGGAGGTGTACTGAATGATGGAGTGGGTGCTGATTATGTGCAGAAAGAGAAGGTTGCTCCTCATGGCTTTGGTTCTAAAGATGCTGGGATAAGGTGCGCTAGTTTGGATGGAGATGCTGATCGGCTTGTTTATTTTATTGTACCACCTGAAAGCAGTGGTAGGATTGATCTTGTTGATGGGGACAAGATACTATCCCTGTTTGCCGTATTTATTAGGGAGCAACTAAGCTTTCTTAATGAGAATGAAGGCATAAAAAATTCCCACCAGGCCCGTCTTGGTGTTGTACAGACTGCCTATGCAAATGGGGCATCTACTAATTATCTTAAACAGTTAGGACTAGAAGTTAATTTTACTCCAACTGGCGTTAAATACCTACATGAAAAAGCTGCTGAATTTGATATTGGTATCTACTTTGAGGCAAATGGCCATGGAACTGTCTTATTTTCAGAATCTTTCGTGGGGTGGTTGGAGGCCAGAACTAAGGAGATTTCTTCAGGATCTAATGGTTCAGAAGGGAAAAAGGCTGCTTTGAGGTTATTGGCAGTCAGTAAGTTGATCAACCAAGCTGTTGGAGATGCTTTGAGTGGATTGCTCTTGGTCGAAGTCATATTACAGTACATGGGATGGTCAATACATAGATGGAATGAACTTTATCACGATTTACCAAGCAGGCAGCTCAAGGTTAAAGTTGCCGACAGAAATGCTGTGATTACAGCAAATGCAGAAACTGTGGTTGTTAGCCCCCCTGGTTTACAAGAAGCCATCAATGCGGAAACTGGGAAGTACCACCAAGGTCGATGCTTTGTGCGACCATCTGGTACTGAGGATGTTGTTCGCGTATATGCTGAGGCATCCACACAGGAAGCAGCTGATACACTAGCCAACTCTGTGGCTAAGCTTGTGGACCAATTCTTGGGGCTCGGTAGCTCCTAA 1698 0.4641 MVSSSAMNDEQQSLLLSSSSRFSPPQGVKLSYGTAGFRADASLLPSTVYRVGILAALRSLKTGSIIGLMITASHNKVSDNGVKIADPNGGMLSQHWEPFADALANAPSPQHLLLLINEFVAKEGILMDGVSQAEVLLGRDTRPSGDALFEAARQGVTSVVGAVATDMGILTTPQLHWMVRARNKGMQVSEQDYFEQLSSSFRYLEDLIPAEKSKFDGLNNKVIVDGSNGVGGVKLKVLGSLLNALVIEVRNSSEDGGVLNDGVGADYVQKEKVAPHGFGSKDAGIRCASLDGDADRLVYFIVPPESSGRIDLVDGDKILSLFAVFIREQLSFLNENEGIKNSHQARLGVVQTAYANGASTNYLKQLGLEVNFTPTGVKYLHEKAAEFDIGIYFEANGHGTVLFSESFVGWLEARTKEISSGSNGSEGKKAALRLLAVSKLINQAVGDALSGLLLVEVILQYMGWSIHRWNELYHDLPSRQLKVKVADRNAVITANAETVVVSPPGLQEAINAETGKYHQGRCFVRPSGTEDVVRVYAEASTQEAADTLANSVAKLVDQFLGLGSS* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0441 565 PIRSF PAGM 6 562 IPR016657 GO:0004610
Vra11g0441 565 SUPERFAMILY Phosphoglucomutase, first 3 domains 192 300 IPR016055 GO:0005975|GO:0016868
Vra11g0441 565 PANTHER PHOSPHOACETYLGLUCOSAMINE MUTASE 7 561 - -
Vra11g0441 565 SUPERFAMILY Phosphoglucomutase, first 3 domains 59 106 IPR016055 GO:0005975|GO:0016868
Vra11g0441 565 SUPERFAMILY Phosphoglucomutase, first 3 domains 128 184 IPR016055 GO:0005975|GO:0016868
Vra11g0441 565 SUPERFAMILY Phosphoglucomutase, C-terminal domain 464 561 IPR036900 GO:0016868|GO:0071704
Vra11g0441 565 Gene3D - 477 561 - -
Vra11g0441 565 Gene3D - 6 187 - -
Vra11g0441 565 Pfam Phosphoglucomutase/phosphomannomutase, C-terminal domain 482 556 IPR005843 GO:0016868|GO:0071704
Vra11g0441 565 CDD PGM3 31 556 IPR016657 GO:0004610
Vra11g0441 565 SUPERFAMILY Phosphoglucomutase, first 3 domains 292 399 IPR016055 GO:0005975|GO:0016868
Vra11g0441 565 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 131 183 IPR005844 GO:0005975|GO:0016868
Vra11g0441 565 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 63 95 IPR005844 GO:0005975|GO:0016868
Vra11g0441 565 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 314 402 IPR005846 GO:0005975|GO:0016868
Vra11g0441 565 Gene3D - 313 399 - -
Vra11g0441 565 Gene3D - 221 310 - -
Vra11g0441 565 PANTHER PHOSPHOACETYLGLUCOSAMINE MUTASE 7 561 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0441 K01836 - gmx:100804530 928.317