Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0424 ATGGGTCGGAGGAACAATGGACTAAACTCTGTTCTCGCTCACCGTTTGATACTCCTCTTCGTGTGTTTGGCTTCGGGCGGTTTGGTCTACGCGCTTCTCTCTGCGGTGCTCGCAAACGGCAGAAGCAGAGTTTCAGACTTTGGGAGGTTGGTTGATGAGGGTGCGTCGGTGCAGAATGAGAAAGGGTGCTGTAGGGGGATTGAGAATTTGGAGCTTTGGGGTTCAGCTGTGAAGTGGGGTTCTGAGTTTAAGTTCAACAACTCTGAAGGATGCTGCAACGCGTGCAAATCAATGTGTTCAGGAAAAGATGGGCCTTGTCTCTGTGATACTTGGGTCTTTTGTGGGGATCGTAAGGCCTGTGGATCCAAGTTCGGTGAGTGTTGGTTGAAGAAACAGAAGGACAGCTTGGCACCTGAACGGCAAGAGGGAGTGCCTCCAGGGGAAGTGGTTGGTTGGACTTCTGGTCTTATTTTTGGGAAAGGAGAGGGTATTATTGGACTGGAAACTGAACATGGAACTCTTCATATTAAACTTTTACCTGACTGTGCTCCACACTCCATTGCCTACATTCTGGAATTGTTGTCTTTGCACCATTGTGCTGGCTGCCAATTTTACCGTGCAGAGAGCCGAGGTCAATCATGGGATTCAGAAGGAAACCATATAGAAAATGCTGGTTTTGGTCCACCTTATGCATTAATTCAAGGGACACTGGAAGCTCAAGGAACAGCTTTCAATAAACTTCCTGTGGAAGATTGTCCAACCCTTAGAAGGGGTTCTGTTGCTTGGATTGGTTCTGGTCCTGAATTCTTCGTTAGCCTTGCTGACCATTCAGAGTGGAAACACGAATACACTGTATTTGGTTCTGTTCTTCCAGAAGACATGCATATTGCAGAGAAAATCTCTTCACTCCCCACAGTAGCTGATGTGTGGAACAATGTCAACGTGACGGTTTTGAAAAAACCTGTTCCTCTGTTGGTCCGTAGAATCCAGAAAAGCCACGTAGATGAAATTTGA 1014 0.4684 MGRRNNGLNSVLAHRLILLFVCLASGGLVYALLSAVLANGRSRVSDFGRLVDEGASVQNEKGCCRGIENLELWGSAVKWGSEFKFNNSEGCCNACKSMCSGKDGPCLCDTWVFCGDRKACGSKFGECWLKKQKDSLAPERQEGVPPGEVVGWTSGLIFGKGEGIIGLETEHGTLHIKLLPDCAPHSIAYILELLSLHHCAGCQFYRAESRGQSWDSEGNHIENAGFGPPYALIQGTLEAQGTAFNKLPVEDCPTLRRGSVAWIGSGPEFFVSLADHSEWKHEYTVFGSVLPEDMHIAEKISSLPTVADVWNNVNVTVLKKPVPLLVRRIQKSHVDEI* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0424 337 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 167 314 IPR002130 GO:0000413|GO:0003755
Vra11g0424 337 Gene3D - 158 322 IPR029000 -
Vra11g0424 337 SUPERFAMILY Cyclophilin-like 160 318 IPR029000 -
Vra11g0424 337 PANTHER EXPRESSED PROTEIN 1 332 - -
Vra11g0424 337 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASES 1 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0424 Vra-Chr11 3074676 3078906 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0424 - - gmx:100800178 629.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0424 11 3074676 3078906 Vra11g0424 11 3074676 3078906 ECH