Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0422 ATGAGACGGTTGAGAGTTGAACTTTCCTGGCGCGCAAAGCCTTCTCTACAATCGATGGTTCAATTTCACGAACACATAATCACAGAGCTTCTAGAAGATTCTAATGGCGGTCTCGTGGTTCTCTCGTCCGGCCTCTCTCTCTCTAAACTCGTTTCGTCTCTCCTTATTCTACACTCCTCATCCGAGGGAACGCTCCTTCTTCTTTCTCCTTCTTCCACTTCACTCAAATCCAAAATTACCTTCCACCTCAAAACCCTAAACCCACAATTCAACCAAATCCCCGCCGAAATCACCGCCGACCTCCCCGCGCATCACCGCCACGCGCTCTACTCCTCCGGCAATGCATTCTTTGTCACGCCGCGCATCCTAATCGTTGACCTCTTGACCAACAAGTTACCAACCTCCAAAATCGCCGGGATCCTACTCCTTAACGCGCACTCGCTCTCCGAGACCTCCACCGAAGCGTTCATTGTTCGGATTTTCCGTTCGCTCAACCGCAGCGCGTTTGTGCGCGCGTTCTCCGACAAGCCGCACGCAATGGTGTCGGGGTTCGCGAAGGCGGAGCGCACGATGAAGTGTCTGCACGTGAGGAAGCTTCACCTGTGGCCGCGGTTTCAGGTTTACGTGTCGCAGGAGTTGGAGAGGGACCCGCCGGAGGTGGTGGACATAAGGGTGCCGATGAGCAAGTACATGGTGGGGATTCAGAAGGCCATTATTGAGGTCATGGATGCTTGTTTGAAAGAGATGAGGAAGACGAACAAGGTCGACGTGGAGGATTTGACAGTGGAGAATGGGTTGTTTAAGTCTTTTGATGAGATCGTGAGGCGACAGTTGGATCCAATTTGGCACACTTTAGGGAAGAAGACCAAGCAGCTTGTCTCAGACCTTAAGACATTGAGGAAACTGTTGGATTATCTAGTCAGGTATGATGCAGTAACTTACTTGAAATATCTGGATACATTGAGAGTGTCAGAAAGTTTTCGGTCTGTTTGGATATTTGCAGAGGCAAGCTATAAGATATTTGATTATGCAAAGAAGCGTGTTTTTCATCTTGTGAGATCAGATGGCTTGAAATTTAACGAGTTAAGTAAGGGTGTCAAAAGCAAAAAGAGAAAAAGTAAGGGTGATGGTAAAGACATTGAAGAAGTTGATGGTACGTCGCACTCTACTTTGAATTCCGGCTTAGTTTTGGAGGAAGTCTTGGAAGAAGCACCAAAGTGGAAGGTCTTACGTGAGGTTCTTGAGGAAGTAGAAGAGGAAAGACAAAAGGCTGGTATGTTGGGGGAAGAAATATTCACTGAAGGTGAAGACACCAACAATGGCATTGTACTAGTGGCATGTAAAGATGAAATGTCATGCTTGCAACTTGAAGAATGCATCACCGGCAGTCCAGAAAAGGTCATGCGTGAAGAATGGAAGAAGTACTTACTAAACAAAGTACAGCTGCGAGACATAGTGAACAAGAAAAAGAAGCCTAAGGATCCCAAACCCAAAGGTTTTGGGATTCTTGACGGAGTTACTCCCATAACACCTGCTCAGAATGCAGAAACCACCAGCATTAGTAAGCAGGAACATGATGCGCTTTTGGCAGCTGCCTCAAAACTAAGAAATGTTTCTGAAAATGACAATGCTAAGGATGCTCCACAGCCTGATATTGGTGGACAGGGAAGTGGTAAAAGAAAGAGAAAAGTGGGGATTAGAAAGGTCCCGGTTGTTCTTGATGGCGTGGGAGTTCGGAACAATGATAAAGAGGGATCAGTGAGTGATAAAATTGGGATGTCTGATTCAAAAAATGAAGTCATCGAAGATGAGACTAATACTGCCAGTGCTGGTAGATTTTCTTCTGAAGGGACATCTGTGGAAAACATAGTTCTTCGGAAGCATTCTAATCCTAATGTTGCAGCAAGAACTGGGAAGCCACTACCACCAGTGCACTTTTATGCCCTAGAAAGTGATCAGCCTATACTAGATATATTAAAGCCCTCAATAGTAATTGTTTACCATCCAGATATGGCCTTTGTCAGGGAAATCGAAGTCTACAAAGCTGAGAATTCCTCAAAAAGGTTGAAAGTGTATTTTCTTTTCTATGAAGCTTCAACTGAGGTTCAGAAGTTTGAGGCAAGTATACGTAGAGAGAATGGAGCATTTGAATCTTTGATTAGGCAAAAATCTATGATGATGATTCCAGTTGACCAGAGTGGGCACTCTTTAGGATTGAATTCTACTTTAGAATCAGATTTAACTACTCCTCAAAACTCAGTAACCAGAAAAGCAGGTGGGAGAAAGGAGGCTGATAAAGAAATGCAGGTTATTGTGGACATGCGGGAGTTCATGAGCAGCCTTCCAAATGTTCTTCACCAGAAGGGAATGCGCATCATCCCAGTGACCCTAGAAGTTGGTGACTATATCTTATCACCGTTAATTTGTGTGGAAAGAAAAAGTATTCAAGATCTCTTTATGAGCTTCACATCAGGTCGTCTATACCACCAGGTCGAGACAATGGTACGGTATTACAGAATACCTGTACTGTTGATTGAGTTTTCACAGGATAAGAGCTTTTCATTCCAGTCTGCTAGTGATATTGGTGATGATGTGACACCAAATAGCATTATATCAAAGTTATCTCTGCTTGCTTTACACTTCCCCAGGCTACGGATAATCTGGTCTCGAAGTTTGCATGCTACTGCTGAAATATTTGCTTCACTTAAGGCAAATCAAGACGAGCCAGATGAAACAAAAGCAATCAGAGTGGGTGTTCCCTCAGAAGAAGGAATTGTGGAAAATGATGTGAGGGCTGAAAATTACAATACATCGGCTGTGGAGTTTCTAAGACGACTTCCAGGTGTTACAGACTCAAACTACAGGGCCATAATGGATGGGTGTAAGAGCTTGGCAGAACTCGCACTTCTTCCTGTGGAGAGGCTAGCGGAATTAATGGGTGGTCATAAAGCTGCTCGGACTCTTAGAGACTTTCTAGATGCTAAATACCCAACTTTGTTGTGA 3003 0.4449 MRRLRVELSWRAKPSLQSMVQFHEHIITELLEDSNGGLVVLSSGLSLSKLVSSLLILHSSSEGTLLLLSPSSTSLKSKITFHLKTLNPQFNQIPAEITADLPAHHRHALYSSGNAFFVTPRILIVDLLTNKLPTSKIAGILLLNAHSLSETSTEAFIVRIFRSLNRSAFVRAFSDKPHAMVSGFAKAERTMKCLHVRKLHLWPRFQVYVSQELERDPPEVVDIRVPMSKYMVGIQKAIIEVMDACLKEMRKTNKVDVEDLTVENGLFKSFDEIVRRQLDPIWHTLGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSESFRSVWIFAEASYKIFDYAKKRVFHLVRSDGLKFNELSKGVKSKKRKSKGDGKDIEEVDGTSHSTLNSGLVLEEVLEEAPKWKVLREVLEEVEEERQKAGMLGEEIFTEGEDTNNGIVLVACKDEMSCLQLEECITGSPEKVMREEWKKYLLNKVQLRDIVNKKKKPKDPKPKGFGILDGVTPITPAQNAETTSISKQEHDALLAAASKLRNVSENDNAKDAPQPDIGGQGSGKRKRKVGIRKVPVVLDGVGVRNNDKEGSVSDKIGMSDSKNEVIEDETNTASAGRFSSEGTSVENIVLRKHSNPNVAARTGKPLPPVHFYALESDQPILDILKPSIVIVYHPDMAFVREIEVYKAENSSKRLKVYFLFYEASTEVQKFEASIRRENGAFESLIRQKSMMMIPVDQSGHSLGLNSTLESDLTTPQNSVTRKAGGRKEADKEMQVIVDMREFMSSLPNVLHQKGMRIIPVTLEVGDYILSPLICVERKSIQDLFMSFTSGRLYHQVETMVRYYRIPVLLIEFSQDKSFSFQSASDIGDDVTPNSIISKLSLLALHFPRLRIIWSRSLHATAEIFASLKANQDEPDETKAIRVGVPSEEGIVENDVRAENYNTSAVEFLRRLPGVTDSNYRAIMDGCKSLAELALLPVERLAELMGGHKAARTLRDFLDAKYPTLL* 1001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0422 1000 MobiDBLite consensus disorder prediction 539 564 - -
Vra11g0422 1000 MobiDBLite consensus disorder prediction 487 507 - -
Vra11g0422 1000 PANTHER DNA REPAIR ENDONUCLEASE XPF 18 996 - -
Vra11g0422 1000 SUPERFAMILY Restriction endonuclease-like 766 904 IPR011335 -
Vra11g0422 1000 Gene3D - 769 916 - -
Vra11g0422 1000 Pfam ERCC4 domain 772 901 IPR006166 GO:0003677|GO:0004518
Vra11g0422 1000 SUPERFAMILY RuvA domain 2-like 931 995 IPR010994 -
Vra11g0422 1000 SMART ERCC4_2 769 849 IPR006166 GO:0003677|GO:0004518
Vra11g0422 1000 Coils Coil 410 430 - -
Vra11g0422 1000 Gene3D - 927 998 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0422 K10848 - gmx:100812359 1643.63