Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0421 ATGGCTAACACTGCAAGCAATAAGAAGACAACTCTGTCAAGTTATTTCCATTCCCTTTCTCAAACACCTCAAAGACTGAAAAAGAGAATGCTAGCCACTTGGACCCCTGATCAGGAACTGAACCAAGGGAGACAAAGGTCTGGAGCAGACATGAAAAGGAGTCTCGAGTGGTATGATTTTGTAGCTCTTGGACTTGGTGGAATGCTAGGTGTTGGTGTTTTTGTTACAACTGGTTCTGTTGCCCATCATCAATCTGGTCCTTCAGTTTTCATATCCTATATTATAGCTGGATTATCAGCTCTTCTCTCCTCCTTATGCTACACTGAATTTGCTGTTCAAGTCCCAGTAGCAGGAGGAGCTTTCAGCTATTTAAGATTAACCTTTGGAGAATTTGTGGGGTATTTTGCTGGGGCAAATATACTAATGGAGTATGTGCTTTCTAATGCTGCTGTATCAAGGAGTTTCACAGAGTATTTGAGCTTTGCATTTGGCCAAAATGATCCAAACGTGTGGAGAGTGAAACTGCATGGATTGCCAAAGGACTATAACATGTTGGATCTCCCAGCTGTTTCTCTTATTATTCTTCTCACTCTCTGCTTGTGCTATAGTACCAAGGAAAGTTCCATGTTGAACCTCATCATGACAATCTTCCATGTGATTTTCTTTGGATTCATCATTGTGAGTGGTTATTGCACTGGAAGTGTGAAAAACTTGGTCAGTCCAAAAGGGCTAGCCCCTTTTGGTGTGAGAGGTGTTGTAAACGGAGCAGCTAAAGTCTACTTCAGCTACATAGGCTATGACTCGGCTTCAACATTGGCAGAGGAAATCAAAGATCCTTCTAAGAACCTACCTATTGGAATTGTTGGTTCAGTTCTCATAACCACAGTGCTCTATTGCCTTATGTCTCTATCTTTGTGCATGATGGCTCCTTATAACAAGATATCAGATAAATCATCATTTGCATTCGCTTTTGCTAAGATTGGAGGGATGTGGGAGAGCGACCTTGTTGGGGCAGGAGCAAGTTTGGGAATAGTGGCTTCTCTCTTGGTTGCCATGTTAGGCCAAGCGAGATACCTTTGTGTTATAGGAAGAGCACGTTTGGTGCCATCTTGGTTAGCTAAAGTTCATCCTTCTACAGCCACCCCATTGAATGCCACACTCTTTTTGGGAGTTTGCACAGGATGTATTGCTCTGTTCACTGATCTTGACATTATAATGGAGTTGATCAACATCGGCACGCTGGTGGTGTTCTACTTGGTGGCCAGTGCTCTGATATACCGTCGATACGTAATCACTAGTCACACCCCTCCTTTCTACACTCTCATTTTCCTCTTTCTCTTTTCACTCAGTGCTCTGGGCTTCTCCCTTTCGTGGAAATTCAATCAGCTACGGTGGGGTCTTCCACTCTTTGGTGGGGTCATGATCACTATCACAGCTTTTTACCAGCACCAGGTGCCTCAGACCCATGCCCAACATGCTGCTACTGATTGGTGTGTGCCATTCATGCCCTGGCCACCTGCCCTCTCCATCTTTCTCAATGTTTTCCTCATTACCACTTTAAAGGTTCTGTCTTTCCAAAGGTTTGCTATGTGGGCATGCTTCATTACCCTCTTCTATCTACTCTATGGTGTTCACTCCACTTACCAAGCAGAAGAGATTGAGATTGCTGCTAATCAAGTCAATTCAAGCTCAACCAACGCACAAACCAATAAGGTGGAAGTTCAAGTGCTATAG 1734 0.4371 MANTASNKKTTLSSYFHSLSQTPQRLKKRMLATWTPDQELNQGRQRSGADMKRSLEWYDFVALGLGGMLGVGVFVTTGSVAHHQSGPSVFISYIIAGLSALLSSLCYTEFAVQVPVAGGAFSYLRLTFGEFVGYFAGANILMEYVLSNAAVSRSFTEYLSFAFGQNDPNVWRVKLHGLPKDYNMLDLPAVSLIILLTLCLCYSTKESSMLNLIMTIFHVIFFGFIIVSGYCTGSVKNLVSPKGLAPFGVRGVVNGAAKVYFSYIGYDSASTLAEEIKDPSKNLPIGIVGSVLITTVLYCLMSLSLCMMAPYNKISDKSSFAFAFAKIGGMWESDLVGAGASLGIVASLLVAMLGQARYLCVIGRARLVPSWLAKVHPSTATPLNATLFLGVCTGCIALFTDLDIIMELINIGTLVVFYLVASALIYRRYVITSHTPPFYTLIFLFLFSLSALGFSLSWKFNQLRWGLPLFGGVMITITAFYQHQVPQTHAQHAATDWCVPFMPWPPALSIFLNVFLITTLKVLSFQRFAMWACFITLFYLLYGVHSTYQAEEIEIAANQVNSSSTNAQTNKVEVQVL* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0421 577 Gene3D Amino acid/polyamine transporter I 50 497 - -
Vra11g0421 577 PANTHER CATIONIC AMINO ACID TRANSPORTER 7, CHLOROPLASTIC-LIKE 12 560 - -
Vra11g0421 577 PIRSF AA_transporter 32 485 - -
Vra11g0421 577 PIRSF AA_transporter 485 567 - -
Vra11g0421 577 Pfam C-terminus of AA_permease 497 546 IPR029485 -
Vra11g0421 577 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 12 560 - -
Vra11g0421 577 Pfam Amino acid permease 55 451 IPR002293 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0421 Vra-Chr11 3061432 3064248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0421 142 551 Organic Solute Cotransporters AT3G10600 49.173 1.28e-136 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0421 - - gmx:100790787 861.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0421 11 3061432 3064248 Vra7g1326 7 30161769 30166399 PCT