Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0414 ATGGCTTCTCAAGTTCTTCTTCAGCAGGCACTGTTTGCGCCTAAGCTCACTTTTCCTTCCTCTTCCCCTCGTAACGTTGCGTTAATTTCTAGGGTTTCTACGACTCCAATTTCATGGCGTTGCACTCCTCTTACTGCTAAGTCTAGTTTCGTCGTGAGAGCTGATTCCAACCTCGAAGGCGGTGGTGAAGCCACCGAAGATGTTCCTTCCGATAATGTTGATGACGTTTCGGAAGGCGAAACAGAACAGCTTTCGGATTCTGAAGCTCCGAAATTGCCCCGAAAAGCCAGAGTCAAGCTTGGAGACGTTATGGGGATATTGAATCAGAGGGCAATTGAGGCATCGGAGAAGGAAAGACCCACGCCAGACATTAGGACTGGGGATATTGTCGAAATCAAATTGGAGGTTCCTGAGAACAAGCGTAGGCTGTCCATTTATAAGGGGATTGTCATCTCAAAACAAAATGCTGGTATTCACACAACTATTCGAATCCGAAGAATCATTGCCGGCACTGGGGTTGAGATAGTCTTCCCAATTTACTCACCGAACATAAAAGAAATCAAAGTGGTAAGCCATCGTAAGGTCAGGAGGGCAAGATTGTACTATCTGAGAGACAAGCTTCCGAGATTCTCCACTTTCAAATGA 645 0.4605 MASQVLLQQALFAPKLTFPSSSPRNVALISRVSTTPISWRCTPLTAKSSFVVRADSNLEGGGEATEDVPSDNVDDVSEGETEQLSDSEAPKLPRKARVKLGDVMGILNQRAIEASEKERPTPDIRTGDIVEIKLEVPENKRRLSIYKGIVISKQNAGIHTTIRIRRIIAGTGVEIVFPIYSPNIKEIKVVSHRKVRRARLYYLRDKLPRFSTFK* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0414 214 PRINTS Ribosomal protein L19 signature 108 137 IPR001857 GO:0003735|GO:0005840|GO:0006412
Vra11g0414 214 PRINTS Ribosomal protein L19 signature 167 190 IPR001857 GO:0003735|GO:0005840|GO:0006412
Vra11g0414 214 PANTHER 50S RIBOSOMAL PROTEIN L19-1, CHLOROPLASTIC-RELATED 24 214 - -
Vra11g0414 214 Gene3D - 97 213 IPR038657 -
Vra11g0414 214 SUPERFAMILY Translation proteins SH3-like domain 111 214 IPR008991 -
Vra11g0414 214 MobiDBLite consensus disorder prediction 59 90 - -
Vra11g0414 214 Pfam Ribosomal protein L19 111 207 IPR001857 GO:0003735|GO:0005840|GO:0006412
Vra11g0414 214 PANTHER RIBOSOMAL PROTEIN L19 24 214 IPR001857 GO:0003735|GO:0005840|GO:0006412
Vra11g0414 214 MobiDBLite consensus disorder prediction 68 82 - -
Vra11g0414 214 TIGRFAM rplS_bact: ribosomal protein bL19 112 206 IPR001857 GO:0003735|GO:0005840|GO:0006412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0414 K02884 - gmx:100500328 371.318