Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0410 ATGCACCGCCAATGCTCTAAAATTTGTGGTGACTCTAGCAGCAGATCAAACAAACAGAACAAAACAATGGAGGTGCATGAGAAGGGTGACGCTCCAAGGCAGAGCCACTCAGAGTTGCAGATTGTGACAGCAATGAGCGTGCCACCGCTTAAGGTGACAGAGCCACGGCGAGTTCGCAAAGTTTTGGTCGGTGACGAGCATACAAACGCCATTCACGGATGCTGCCAGATGGTTCTGTGCTACGAGAATCTGAAGGAGGATGATCATGGTTGGTACATGGCTGGTTGGATGGTGGAGTCACTGGCCAGGGTTCTGTTGGATCACCCTCTTCTCGCAGGTCGCCTTCAAAGAAAAGATGGCACAGGGTTCGAAATCGTGGCCAATGATTCCGGTATCAGACTTTTAGAGGCATGTTACCCGACAAGCTTGTCACACTTTCTTGAGCTGAACGAAAGAAACAAACATCTCATGACCGAGCTTGTGTTCTGGAAGGAAATCGATGCTGAGTGTCCTCAGTTCTCTCCCCTTTGTTATGTTCAGGTTACAAATTTTGAATGTGGAGGGTACAGTATTGGCATTAGTTGCAGCCTGCTATTGGCAGATGTTTTTGTGGTGGATAATTTTCTCGGGAAATGGGCTGAAATACACAAGAACATGTCAGACCAACGTGGAGAAATTAAGACACCCGTATTTTACCACCCACCCACGAAAAAGTCGGAGTCTTTTCCATTAATTATCCGTTCTGAGAGTAAAAGTAAAAGTGGGGTTCAGAGGTTGGTGTTCAAAATCATTACAGAGGATATGAACTCAATGGAAGAGATGTGGAGGAAAATGGCGACGAGTGATCTGGGTTCAGAATTTTGTTCAGAGGTGATGAAAGTTGAAAGTTGGTCAATGAATGAGAGAATGAGATTGAATGAGATGAGAGATTTTGGAGTGCAGGAAGTGAGATTTAATGAGGAAAACAAACCTATTCATGTTTGTTCTTGGATTGATTATGTGAGGGATGAATATGTTATGACAGTGGCACTTCCCAACCTCAAGAACAATTCATGTGCTGTAATTCTAGTTTCACTGTGTTAG 1083 0.4441 MHRQCSKICGDSSSRSNKQNKTMEVHEKGDAPRQSHSELQIVTAMSVPPLKVTEPRRVRKVLVGDEHTNAIHGCCQMVLCYENLKEDDHGWYMAGWMVESLARVLLDHPLLAGRLQRKDGTGFEIVANDSGIRLLEACYPTSLSHFLELNERNKHLMTELVFWKEIDAECPQFSPLCYVQVTNFECGGYSIGISCSLLLADVFVVDNFLGKWAEIHKNMSDQRGEIKTPVFYHPPTKKSESFPLIIRSESKSKSGVQRLVFKIITEDMNSMEEMWRKMATSDLGSEFCSEVMKVESWSMNERMRLNEMRDFGVQEVRFNEENKPIHVCSWIDYVRDEYVMTVALPNLKNNSCAVILVSLC* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0410 360 Pfam Transferase family 96 219 - -
Vra11g0410 360 MobiDBLite consensus disorder prediction 1 36 - -
Vra11g0410 360 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 35 347 - -
Vra11g0410 360 MobiDBLite consensus disorder prediction 20 34 - -
Vra11g0410 360 PANTHER OS02G0653400 PROTEIN 35 347 - -
Vra11g0410 360 Gene3D - 38 243 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0410 Vra-Chr11 2988059 2989957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0410 101 214 Acyl Lipid Metabolism Gene Families AT3G23840 28.947 1.26e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0410 - - var:108335442 687.567