Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0409 ATGGCTACAACAACCTCGTCCTTTGTCTTCACGAACATTGATGGGTTTGGACATGGAATTGGAACCCGCAGAAGTTACAGGGTCATCAGGGCTCAATCTCAGTCTGCTGTACCAAAGGAACAAGTTGTGATCGTGGGTGCTGGGATCGCAGGCCTTGCAACTGCTGTCTCCCTTCACAGGCTTGGAGTTCAGTCCCTGGTTCTGGAGCAGGCAGAGTCACTTCGAACCGGTGGAACCTCACTGACCCTTTTCAAAAATGGATGGAGGGTACTCGATGCAATTGGAGTGGCTGATGATCTCAGAACTCAGTTCTTAGAAATTCAAGGGATGGTGGTGAATTCCGAGGATGGGAGGGAACTACGAGCCTTCAATTTCAAGCAAGAGGATGAAAGTCAAGAGGTACGTGCAGTGGAGAGGAAAGTGCTTTTGGAAACCTTGGCTAGTCAGCTACCACGGGATACCATTAAATTTTCTTCACAATTAGCAAAGATTGAAGCCACTTCAAACGGGGATACCTTGTTGGAACTTGTGGATGGGTCAAAGCTGCTTGCAAAGACTGTGATAGGGTGCGATGGAATTCGATCACCTATAGCCAAGTGGATGGGATTTCCTGAGCCCAAGTACGTTGGTCACTGTGCTTTCCGAGGACTTGCGTCTTATTCTGATGGACAACCTTTTGGACCAAGAGTGAATTATATCTACGGAAGAGGGTTGCGCGCGGGCTTTGTTCCTGTTTCTCCGACCAAAGTTTATTGGTTCATCTGCTTCAATAGTCCCTCTCCAGGTCCAAAAATAACAGACTCATTGGTGCTGAAGAACCAAGCTAAGGAACTAGTGAAGGATTGGCCTTCAGAGCTATTGAACATAGTGGATTCTACACCAGATGATACTGTGATCAAGACTCCATTGGTAGACAGATGGCTTTGGCCAGCCATAAGTCCAGGTGCTTCTGCTGGAAGAGTTGTGGTGGTTGGAGATGCGTGGCATCCAATGACCCCAAATCTTGGGCAAGGAGCTTGTTGTGCACTGGAGGACTCAGTGGTTCTTGCCAAAAAGCTTGCCAGAGCAATCAAATCTGAAGACCCTTCTGTGGAAGAAGCTTTCAGGTCCTATGGCGCTGAAAGATGGCCCCGTGTGTTTCCACTAACCATACGTGCAAACCTTGTGGGTTCCGCTTTGCAGTGGGAGAACCCAGTGGTGTGTTCTGTCAGGAACAATATTGTCATACCTAAGCTAGTCAGACTCCAGCCATTACTGGAGCATACAAATTTTACTTGTGAGAGTCTATAA 1290 0.4775 MATTTSSFVFTNIDGFGHGIGTRRSYRVIRAQSQSAVPKEQVVIVGAGIAGLATAVSLHRLGVQSLVLEQAESLRTGGTSLTLFKNGWRVLDAIGVADDLRTQFLEIQGMVVNSEDGRELRAFNFKQEDESQEVRAVERKVLLETLASQLPRDTIKFSSQLAKIEATSNGDTLLELVDGSKLLAKTVIGCDGIRSPIAKWMGFPEPKYVGHCAFRGLASYSDGQPFGPRVNYIYGRGLRAGFVPVSPTKVYWFICFNSPSPGPKITDSLVLKNQAKELVKDWPSELLNIVDSTPDDTVIKTPLVDRWLWPAISPGASAGRVVVVGDAWHPMTPNLGQGACCALEDSVVLAKKLARAIKSEDPSVEEAFRSYGAERWPRVFPLTIRANLVGSALQWENPVVCSVRNNIVIPKLVRLQPLLEHTNFTCESL* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0409 429 SUPERFAMILY FAD/NAD(P)-binding domain 41 407 IPR036188 -
Vra11g0409 429 PANTHER FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN 31 427 - -
Vra11g0409 429 PANTHER FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN 31 427 IPR044560 -
Vra11g0409 429 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 41 63 - -
Vra11g0409 429 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 183 198 - -
Vra11g0409 429 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 318 333 - -
Vra11g0409 429 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 333 349 - -
Vra11g0409 429 Gene3D - 40 408 IPR036188 -
Vra11g0409 429 Pfam FAD binding domain 41 378 IPR002938 GO:0071949
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0409 Vra-Chr11 2985461 2987827 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0409 36 429 Miscellaneous Gene Families AT5G05320 34.975 2.30e-80 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0409 - - gmx:100787671 766.533