Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0408 ATGATGCAGTTCAGCTCCACCGTACCAGCCCACAACCTTCACAAGTTCCAGGCGATAAGGTGCCCCAGCTTCAGCTTCAGATGCCAAGCCTCCTCTTCCTCAACCTTTCAGAAGCCCTTTGTCTCCACCGAATCAACTCGCCTGCACCTCGCCAACCTCGACAAGCTCCTCGAGACCCAGAAGCCCGTGGACCCACCCTCCCAACTCCACCACCACCAACAGCCCCCACACCAACCCATCATCAACCACCCTAAGGAAAAGAAAGGAAGAAGCTTTCTCGAAGGCCTCAACTTGGCAAGGCTCTGGCCGGAGATGAAGGCGAACGAGGAAATGTCCCCGCGCCACCTCAATCGCCTCCAGCGGCTGCTCTCCATGACTGCGGAGTATTCCCCGAGGAACATCCTCGGCGGGCGGTGGAGAGAGTACCACGGCAGCAACGACTGGAAAGGGATGTTGGATCCTCTGGACGAGAATCTCCGGCGAGAAGTCGTCCGCTACGGAGAATTCGTCCAAGCCGCGTATCAGGCTTTTCACTCCGACCCTGCCATGTCAACAGAGGAGCCGCCACACCCCCGCCACGTGTCTCTTCCCGATAGATCGTACAGAGTGACGAAAAGCCTCTACGCCACGTCATCGATCGGGTTGCCGAAATGGGTGGATGACGTGGCTCCGGATCTTGGATGGATGACCCAGCGGTCGAGCTGGGTCGGGTACGTGGCGGTTTGCGAAGACAGAAGAGAGATCGCACGGATGGGAAGGAGAGACATTGTTATCTCTCTCCGGGGAACCTCGACGTGTCTGGAATGGGCCGAGAATATGAGGGCCCAATTGGTTGACCTCGAGGATGTTCCGGAAGGGCAAGGAAAGCCCAAGGTGGAGTGTGGGTTCATGAGTCTGTACAAGACGAAAGGCGCACACGTGGCGAGTCTGTCAGAGTCCGTTGTGGAGGAAGTGAAGAGACTCGTCAATCTGTACAGAGACGAAGAATTAAGCATTACCGTGACAGGACACAGCCTGGGAGCGACGCTGGCCCTACTGGTGGCCGATGAAATAAGCACGTGTTGCGCCGGAGTTCCACCCGTGGCAGTTTTTTCGTTCGGCGGGCCGCGCGTGGGGAACAAGGCCTTCGGCGATCGTGTGACGGCGAAGAACGTGAAAGTTTTGCGAATAGTGAACTCGCAGGACGTGATTACGCGCGTGCCTGGGATCTTCGTGAGCGAGGAGCTTGAAGAGAAAATACGGAGAGTGGGAGGGGGAGTGTTGGAGGAGACGACGCCGTTGGCGTACTCGCACGTGGGAAGTGAGCTGCGCGTGCAGACGAAGATGTCGCCGTACCTTAAGCCGGACGCGGACATGGCGTGTTGCCATGATTTGGAGGCTTACTTGCATTTGGTGGATGGATTCCTGGCGTCGAATTGTCCGTTCAGAGCGAATGCAAAGAGAAGCTTGGCGAGGTTGATGCAAGATCAAAGCGCCAATGTAAAAAAATTGTACACTAGCAGGGCTAAAGCCCTAACTGTTAATCTCACTAGACAGGGATCCATCTCCATGTCTAATTGTTTACCAAGTCCATCTTAA 1578 0.5596 MMQFSSTVPAHNLHKFQAIRCPSFSFRCQASSSSTFQKPFVSTESTRLHLANLDKLLETQKPVDPPSQLHHHQQPPHQPIINHPKEKKGRSFLEGLNLARLWPEMKANEEMSPRHLNRLQRLLSMTAEYSPRNILGGRWREYHGSNDWKGMLDPLDENLRREVVRYGEFVQAAYQAFHSDPAMSTEEPPHPRHVSLPDRSYRVTKSLYATSSIGLPKWVDDVAPDLGWMTQRSSWVGYVAVCEDRREIARMGRRDIVISLRGTSTCLEWAENMRAQLVDLEDVPEGQGKPKVECGFMSLYKTKGAHVASLSESVVEEVKRLVNLYRDEELSITVTGHSLGATLALLVADEISTCCAGVPPVAVFSFGGPRVGNKAFGDRVTAKNVKVLRIVNSQDVITRVPGIFVSEELEEKIRRVGGGVLEETTPLAYSHVGSELRVQTKMSPYLKPDADMACCHDLEAYLHLVDGFLASNCPFRANAKRSLARLMQDQSANVKKLYTSRAKALTVNLTRQGSISMSNCLPSPS* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0408 525 MobiDBLite consensus disorder prediction 61 84 - -
Vra11g0408 525 CDD Lipase_3 192 466 - -
Vra11g0408 525 Pfam Lipase (class 3) 257 403 IPR002921 GO:0006629
Vra11g0408 525 SUPERFAMILY alpha/beta-Hydrolases 160 468 IPR029058 -
Vra11g0408 525 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 2 510 - -
Vra11g0408 525 Gene3D alpha/beta hydrolase 138 514 IPR029058 -
Vra11g0408 525 PANTHER GLYCEROLIPASE A1 2 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0408 Vra-Chr11 2981245 2982964 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0408 26 525 Acyl Lipid Metabolism Gene Families AT4G16820 57.752 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0408 - - gmx:100806573 929.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0408 11 2981245 2982964 Vra8g2373 8 41921202 41926005 PCT