Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0403 ATGGCTTCCTTAACCCTCCTTATTCCAACAATTATCTGTCTTCAATTTCATCTTCTTTCATTAGCTTTTGCACAAGTTAATATCGGTTCCACAATTTCCACCGATAACAATGGAGTGTGGCGTTCACCTTCGGGTCATTTTGCATTGGGGTTTCGTGCATTGAATAATAACACGGATCCGAATACAAAGCTGTTCATGGTTGCCATATGGTACGACATGATACCCGACAAGACCGTTGTTTGGAGTTTAAAAACAGACAACAAACTTGCAACAGCACCGGCGGGATCACAGTTTCGGATTTCTTCGGCGGGGCTAACACTGGCGGGTCCCGAAGGAGATTCCATATGGGCATCAAACCTGGCAAGTGTTGTCTCCGTAGGTTCTATGCTTGATACTGTGGATGTTTACAGCTTTGGGGTAATGCTGTTGGAAATAATTTGCAGCAGAAGAAGTGTGTTAATGATGGAGGCTGGGGAAGAAGAGAAGGCAGTGCTGACAGATTGGGCTTGTGATTGCTTTGTGGAAGGGAGAATAGATGTTCTTGTGGAGAATGATGAAGAGGCCTTATCTGACTATGTGAGGCTACAAAAATGGGTGGAAATTGCAATATGGTGCATTCATGAGGAACCTCAAATGAGACCAACAATGGGGATTGTCATGCAAATGCTCGAAGGCTTAGTTGAAGTCCCTAACCCACCATCTGTGATGCGTTGA 714 0.4454 MASLTLLIPTIICLQFHLLSLAFAQVNIGSTISTDNNGVWRSPSGHFALGFRALNNNTDPNTKLFMVAIWYDMIPDKTVVWSLKTDNKLATAPAGSQFRISSAGLTLAGPEGDSIWASNLASVVSVGSMLDTVDVYSFGVMLLEIICSRRSVLMMEAGEEEKAVLTDWACDCFVEGRIDVLVENDEEALSDYVRLQKWVEIAIWCIHEEPQMRPTMGIVMQMLEGLVEVPNPPSVMR* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0403 237 SUPERFAMILY Protein kinase-like (PK-like) 133 232 IPR011009 -
Vra11g0403 237 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 133 234 - -
Vra11g0403 237 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 12 132 - -
Vra11g0403 237 Gene3D Transferase(Phosphotransferase) domain 1 116 229 - -
Vra11g0403 237 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 12 132 - -
Vra11g0403 237 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 133 234 - -
Vra11g0403 237 SUPERFAMILY alpha-D-mannose-specific plant lectins 65 124 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0403 Vra-Chr11 2939670 2942027 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0403 126 231 Receptor kinase-like Gene Family AT4G29050 34.862 4.59e-15 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0403 - - vra:106776611 478.018