Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0364 ATGGCGGGAGCTACTCCCTCCTGTGTTTTCTGTGCAATTGCCGCCAAATCCAACACTGACAATACTCTTCTTCATTCCGACGATAAGGTTGTCGCATTCCAGGACATTAATCCTTCCGCTTTCAGGCATTACTTAGTAGTTCCTGTGGCGCACATTCCTACTGTTAAAGATCTTCAGAGAAAACCTGACGACCATTCTTTGGTGAATCACATGTTAGAGGTGGGAAAAACGTTATTACTAAGAGATGCGCCTCAGGCCCAGCAATACAGATTTGGCTTTCATCAGCCTCCACTGAACACTGTTAACCACCTACACCTCCATTGTTTGGCGCTACCATATACGCCCAGGTGGCGATCAATAAAATACTTATCTTTTGGACCACTTGGCTTCATTGAAGCGGAGAAGTTTCTGGAAAAGATAAAGCCATCGTCCACATTTCAATGA 444 0.4482 MAGATPSCVFCAIAAKSNTDNTLLHSDDKVVAFQDINPSAFRHYLVVPVAHIPTVKDLQRKPDDHSLVNHMLEVGKTLLLRDAPQAQQYRFGFHQPPLNTVNHLHLHCLALPYTPRWRSIKYLSFGPLGFIEAEKFLEKIKPSSTFQ* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0364 147 PANTHER HISTIDINE TRIAD NUCLEOTIDE-BINDING PROTEIN 3 4 142 - -
Vra11g0364 147 ProSiteProfiles HIT domain profile. 9 122 IPR011146 GO:0003824
Vra11g0364 147 Pfam Scavenger mRNA decapping enzyme C-term binding 7 119 - -
Vra11g0364 147 PANTHER APRATAXIN-RELATED 4 142 - -
Vra11g0364 147 Gene3D - 10 147 IPR036265 -
Vra11g0364 147 PRINTS Histidine triad family signature 31 49 IPR001310 -
Vra11g0364 147 PRINTS Histidine triad family signature 99 109 IPR001310 -
Vra11g0364 147 SUPERFAMILY HIT-like 6 132 IPR036265 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0364 K22966 - gmx:100799719 271.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0364 11 2638555 2641395 Vra11g0364 11 2638555 2641395 ECH