Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0363 ATGCCTCCTCCTCTGTTTCTCCTCTGTTTCATGCTCTGCATTTCCCACACACACCAAATCATTATATTATCCTTAACAAACTCAATTTCGAAAACCCAATTCAACAGTACCCATCACCTTCTCAAAGCCACCTCCACTCGCTCAGCCTCGCGCTTCCACCGCCACCGCCAAACCCAGAACTCAATCTCTCTCCCGCTTTCTTCAGGAAGCGACTACACCCTTTCCTTCAATTTAGCTTCAAACCCTTCTCAATCCATAACCCTTTACATGGACACGGGCAGCGACCTTGTCTGGTTCCCATGCACTCCCTTCCAGTGCATTCTCTGCGAAGGCAAATTCAACGCTACAACACCCCTCAACGTCACGCGCTCCCACCGTGTCTCCTGCCAATCCCCTGCATGCTCCGCAGCACACTCCTCTATGTCCTCCCATGACCTCTGCGCAATCGCACGTTGTCCTCTCGACAGTATCGAAACCTCTGATTGCTCTTCTGCCACCTGTCCACCTTTCTACTACGCTTACGGAGATGGAAGCTTCATCGCGCGCCTCTACCGCGATTCTCTATCCATGTCCTCTCTTTTCCTTAAAAACTTCACCTTCGGTTGCGCCCACACCGCACTCGCCGAACCCACCGGCGTTGCAGGTTTCGGTCGGGGCTTGTTGTCACTCCCTGCGCAACTTGCTACCCTCTCTCCGAACCTCGGTAACCGTTTTTCTTACTGTCTAGTTTCTCACTCTTTCGATCAACAACGAGTTCGCAAACCGAGTCCACTCATTCTCGGCCGCTACGACGATTCCGCAGAGGGTAGTGAGTTTGTTTACACGTCCATGCTTCGGAACCCGAAGCATCCTTATTTCTACTGCGTCGGACTTGCCGGAATCTCCGTCGGGAAGAGGACTATTCCGGCGCCGGAGATGCTGCGAAGGGTGAACCACAGAGGGGACGGCGGCGTGGTTGTTGACAGCGGAACCACGTTCACAATGCTGCCTGCGAGTTTGTATAACTCGGTGGTGAGTGAATTTGACAGGCGAGTGGGGCGAGTTCAGAAACGCGCGAGTAAGGTGGAGGAGAAAACGGGCCTCGGGCCGTGTTATTTTTTGGAAGGGTTGGTGGAGGTGCCTACGGTGACGTGGCACTTTGTGGGGAATGATTCAAATGTGGTGCTGCCTAGAGGAAACTATTTTTATGAGTTTTTAGACGGTGGTGATGGGGTTAGAAAGAAGGTGGGGTGCTTGATGTTGATGAACGGTGGTGATGACAGTGAGTTGAGCGGTGGACCTGGAGCCACACTTGGGAACTATCAGCAGCAAGGGTTTGAGGTGGTGTATGACTTGGAAAACCAGCGGGTGGGTTTCGCTAAGAGGCAATGCGCTTCGCTTTGGGATAGTCTCAACCGTCACAAAAACTAG 1410 0.5262 MPPPLFLLCFMLCISHTHQIIILSLTNSISKTQFNSTHHLLKATSTRSASRFHRHRQTQNSISLPLSSGSDYTLSFNLASNPSQSITLYMDTGSDLVWFPCTPFQCILCEGKFNATTPLNVTRSHRVSCQSPACSAAHSSMSSHDLCAIARCPLDSIETSDCSSATCPPFYYAYGDGSFIARLYRDSLSMSSLFLKNFTFGCAHTALAEPTGVAGFGRGLLSLPAQLATLSPNLGNRFSYCLVSHSFDQQRVRKPSPLILGRYDDSAEGSEFVYTSMLRNPKHPYFYCVGLAGISVGKRTIPAPEMLRRVNHRGDGGVVVDSGTTFTMLPASLYNSVVSEFDRRVGRVQKRASKVEEKTGLGPCYFLEGLVEVPTVTWHFVGNDSNVVLPRGNYFYEFLDGGDGVRKKVGCLMLMNGGDDSELSGGPGATLGNYQQQGFEVVYDLENQRVGFAKRQCASLWDSLNRHKN* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0363 469 Gene3D Acid Proteases 56 261 IPR021109 -
Vra11g0363 469 Pfam Xylanase inhibitor C-terminal 287 453 IPR032799 -
Vra11g0363 469 ProSiteProfiles Peptidase family A1 domain profile. 72 453 IPR033121 -
Vra11g0363 469 CDD pepsin_A_like_plant 72 457 IPR034161 -
Vra11g0363 469 Pfam Xylanase inhibitor N-terminal 80 261 IPR032861 -
Vra11g0363 469 SUPERFAMILY Acid proteases 81 462 IPR021109 -
Vra11g0363 469 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 4 466 - -
Vra11g0363 469 PANTHER ASPARTYL PROTEASES 4 466 IPR001461 GO:0004190|GO:0006508
Vra11g0363 469 Gene3D Acid Proteases 262 463 IPR021109 -
Vra11g0363 469 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 318 329 IPR001969 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0363 Vra-Chr11 2631746 2633734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0363 42 460 Miscellaneous Gene Families AT1G77480 25.828 7.93e-12 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0363 - - gmx:100807884 828.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0363 11 2631746 2633734 Vra11g0363 11 2631746 2633734 ECH