Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0357 ATGGAAAGCCTTTCACTTGCAACAATGTCTACCCTCCCTACCACTCAAGGCAAAACAATCCCAGATGCCTCTGACTACAAGGGCCACCCCGCAGAGAGGTCCAAAACCGGTGGTTGGACTGCATCCGCCATGATATTAGGAGGAGAAGTGATGGAGAGGTTGACAACACTGGGCATCGCCGTGAACTTGGTCACATATTTGACAGGGACCATGCATTTGGGTAATGCTGCCTCTGCCAACGTTGTAACCAACTTCTTGGGAACCTCCTTCATGCTCTGTCTGCTTGGCGGCTTCCTCGCCGATACTTTCCTAGGAAGATACCGCACCATCGCCATCTTCGCGGCAGTTCAAGCCACTGGTGTTTCGATATTGACGATATCAACCATAGTTCCCAGCCTGCACCCTCCGAAGTGCACGGAGGACACCGTGCCACCTTGCGTGAGAGCGAATGAGAAACAGTTAATGGTGCTGTATCTGGCGCTTTACGTAACGGCTCTTGGCACTGGTGGTTTGAAATCGAGTGTGTCAGGATTCGGTTCGGATCAGTTCGATGATTCGGACAAAGATGAGAAGAAGCAGATGATAAAGTTCTTTAACTGGTTCTACTTCTTCGTGAGCACAGGGTCTCTGATGGCAACGACGGTTCTTGTGTACGTGCAAGACAACGTAGGACGAGGATGGGGTTATGGTATCTGTGCGGGTGCGATTGTGGCTGCTCTTTTTGTGTTTTTGTCGGGTACGAGGAAGTACCGGTTCAAGAAACTCGTGGGGAGTCCACTCACTCAGTTTGCAGAAGTGTTTGTGGCTGCCATAAGGAAGAGGAAGTTGGAATTGCCCTCTGATTCAACGTTGCTCTTCAATGATTATGACACCAAGAAGCAGACCATGCCGCATAGCAAGCAGTTCCGTTTCTTGGACAAAGCTGCAATCGTGGATTCATCGGGTGGTGGAATGAAGAGAAAGTGGTATCTTTGCACCTTAACAGATGTGGAAGAAGTAAAATCGGTGATAAGAATGCTTCCCATATGGGCTACCACCATCATGTTTTGGACTATCCACGCTCAAATGACAACATTCTCGGTGTCACAAGCGACCACCATGGACCGTCACATAGGAAAAACATTTCAAATGCCCGCAGCATCGATAACAGTTTTCTTAATCGGAACAATTCTCCTAACGGTCCCATTTTACGACCGTTTCATTGTTCCGGTGGCAAGAAAAGTGCTGAAGAACCCACATGGGTTGACCCCTTTGCAACGCATAGGAGTTGGTTTGGTGTTCTCGGTGTTTGCCATGGTGGCAGGGGCACTGATAGAGATAAAGAGACTGAGATATGCAGAGTCACATGGTTTGGTAGATAAGACAAAAGCAAAGATCCCAATGACGGTGTTTTGGTTGATCCCACAAAATTTCTTTGTGGGGGTAGGGGAGGCCTTTATGTACATGGGACAGTTAGACTTTTTCCTTAGAGAGTGCCCGAAAGGGATGAAAACAATGAGCACAGGGTTGTTCCTGAGCACACTGTCTCTGGGTTTTTTCTTCAGCTCCTTGTTGGTGTCTATAGTGAACAAAATGACAGCACATGGTAGGCCATGGCTCGCAGATAATCTTAACAAAGGGAGGCTCTATGATTTTTACTGGCTTTTGGCTATACTCAGTGCCATAAATGTTATGTTTTACTTGGTTTTTGCTAAAGGGTACGTTTACAAGGAGAAGAGGCTTGCTGAGGAGGGCATAGAATTGGAAGAAACAGATGATGCTGCTTTTCATGGGCATTGA 1779 0.4744 MESLSLATMSTLPTTQGKTIPDASDYKGHPAERSKTGGWTASAMILGGEVMERLTTLGIAVNLVTYLTGTMHLGNAASANVVTNFLGTSFMLCLLGGFLADTFLGRYRTIAIFAAVQATGVSILTISTIVPSLHPPKCTEDTVPPCVRANEKQLMVLYLALYVTALGTGGLKSSVSGFGSDQFDDSDKDEKKQMIKFFNWFYFFVSTGSLMATTVLVYVQDNVGRGWGYGICAGAIVAALFVFLSGTRKYRFKKLVGSPLTQFAEVFVAAIRKRKLELPSDSTLLFNDYDTKKQTMPHSKQFRFLDKAAIVDSSGGGMKRKWYLCTLTDVEEVKSVIRMLPIWATTIMFWTIHAQMTTFSVSQATTMDRHIGKTFQMPAASITVFLIGTILLTVPFYDRFIVPVARKVLKNPHGLTPLQRIGVGLVFSVFAMVAGALIEIKRLRYAESHGLVDKTKAKIPMTVFWLIPQNFFVGVGEAFMYMGQLDFFLRECPKGMKTMSTGLFLSTLSLGFFFSSLLVSIVNKMTAHGRPWLADNLNKGRLYDFYWLLAILSAINVMFYLVFAKGYVYKEKRLAEEGIELEETDDAAFHGH* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0357 592 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 17 580 IPR000109 GO:0016020|GO:0022857|GO:0055085
Vra11g0357 592 PANTHER PEPTIDE/NITRATE TRANSPORTER 17 580 - -
Vra11g0357 592 SUPERFAMILY MFS general substrate transporter 27 567 IPR036259 -
Vra11g0357 592 Pfam POT family 107 527 IPR000109 GO:0016020|GO:0022857|GO:0055085
Vra11g0357 592 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 1. 96 120 IPR018456 GO:0006857|GO:0016020|GO:0022857
Vra11g0357 592 MobiDBLite consensus disorder prediction 1 21 - -
Vra11g0357 592 MobiDBLite consensus disorder prediction 1 34 - -
Vra11g0357 592 Gene3D MFS general substrate transporter like domains 12 577 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0357 Vra-Chr11 2587195 2590878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra11g0357 11 583 Organic Solute Cotransporters AT1G12110 63.419 0.0 730
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0357 - - gmx:100813789 1037.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0357 11 2587195 2590878 Vra11g0357 11 2587195 2590878 ECH