Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra11g0353 ATGCCAGTAAAATCAATTATGTCCAGCACTGCCCCGCTTCTCACGTCGCGCCACGTGGCAGTGATCGGTGCCGGCGCCACCGGTCTTGTGGCGGCGCGCGAGCTCCGACGCGAGGGGCACCGGGTGGTAGTTTTCGAGCGAGGAGACGAAGTAGGAGGCACGTGGGTGTACACTCCGGAGGTGGAATCAGATCCGATAGGTTTGAACCCGAAGCGGAGCATTGTCCACTCGAGCCTCTACGATTCGCTCCGAACCAATCTGCCTCGGGAGAGCATGGGTTTCCGAGATTACCCATTCAAGAAGAGGGAAGAGAAAGGGAGGGATTCTAGAAGGTTCCCTGGTCACAGAGAGGTTTTGATGTATTTGCAGGATTTCGCAGCTCGTTTTGAAATCTATGAACTGGTGCGGTTTGGGACGGAAGTCGTGTTCGCGGGATTGGATAAGGGTGGAAAGTGGAGGGTGACGTCAGCATCGCGGAATACTGATCCTGTGGACGAGATTTACGACGCCGTCATCGTTTGCAACGGACATTATGTTAAGCCTCGTCTTCCTCATATCCCTGGTATTAACGTGTGGCCAGGAAAGCAGCTTCATAGCCATAATTATAGAAGACCTGAGCCATATCAAGATAAAGTTGTAGTTTTAATTGGCAACTCCTCGAGTGCGGTTGATATCTCTCGAGATATCGCAACGGTTGCTAAAGAAGTCCACATTGCAGCTTGGTCTCTTGAAGAAGATAAGCTAGGAAAAATGCATGGCCATGAAAACATGTGGCTTCATTCTATGGTTGACAGTGTTCATGAAGATGGTACAGTGGTTTTTAAAGATGGAAATGCAGTTGCTGCTGACTTCATCATACATTGCACAGGATATAGCTATGAGTTTCCTTTTCTTGAAACCAACGGGGAGGTGACTGTTGATGACAACCGTGTAGGACCACTCTACAAGCATGTTTTTCCACCAGCCTTGGCTCCATGGCTTTCATTTGTTGGGTTGCCTTGGAAGATTGTTCCCTTCCCTCAGTTCGAGTTGCAGAGCAAGTGGATTGCTGCAGTTTTGTCTAACCGCATCGCACTTCCTTCAAAAGAGGAGATGTTAGAAGATGTTGAAGCTTTCTACTCATCGCTTGAAGCCTCTGGCACACCTAAGCGTTACACTCATAACATGGCCCTTCTTCAGTGGGAATACAATGATTGGATTGCGGATCAGTGTGCATTTCCTTATATTGAAGAATGGAGAAAGCAAATGTACTTGGCAACAGGTAAGAACAGGGCCTTGCGACCCGACTCTTACCGTGACGAGTGGGAGGATGATGATTTGGTTCAGCAAGCTGAACAGGATTTTGCCAATTATCTGATCTGA 1362 0.4853 MPVKSIMSSTAPLLTSRHVAVIGAGATGLVAARELRREGHRVVVFERGDEVGGTWVYTPEVESDPIGLNPKRSIVHSSLYDSLRTNLPRESMGFRDYPFKKREEKGRDSRRFPGHREVLMYLQDFAARFEIYELVRFGTEVVFAGLDKGGKWRVTSASRNTDPVDEIYDAVIVCNGHYVKPRLPHIPGINVWPGKQLHSHNYRRPEPYQDKVVVLIGNSSSAVDISRDIATVAKEVHIAAWSLEEDKLGKMHGHENMWLHSMVDSVHEDGTVVFKDGNAVAADFIIHCTGYSYEFPFLETNGEVTVDDNRVGPLYKHVFPPALAPWLSFVGLPWKIVPFPQFELQSKWIAAVLSNRIALPSKEEMLEDVEAFYSSLEASGTPKRYTHNMALLQWEYNDWIADQCAFPYIEEWRKQMYLATGKNRALRPDSYRDEWEDDDLVQQAEQDFANYLI* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra11g0353 453 PRINTS Flavin-containing monooxygenase (FMO) signature 17 33 IPR000960 GO:0050660|GO:0050661
Vra11g0353 453 PRINTS Flavin-containing monooxygenase (FMO) signature 41 65 IPR000960 GO:0050660|GO:0050661
Vra11g0353 453 PRINTS Flavin-containing monooxygenase (FMO) signature 197 211 IPR000960 GO:0050660|GO:0050661
Vra11g0353 453 PRINTS Flavin-containing monooxygenase (FMO) signature 224 239 IPR000960 GO:0050660|GO:0050661
Vra11g0353 453 PRINTS Flavin-containing monooxygenase (FMO) signature 275 302 IPR000960 GO:0050660|GO:0050661
Vra11g0353 453 PRINTS Flavin-containing monooxygenase (FMO) signature 340 353 IPR000960 GO:0050660|GO:0050661
Vra11g0353 453 PANTHER DIMETHYLANILINE MONOOXYGENASE 12 451 - -
Vra11g0353 453 SUPERFAMILY FAD/NAD(P)-binding domain 15 239 IPR036188 -
Vra11g0353 453 PANTHER FLAVIN-CONTAINING MONOOXYGENASE 12 451 - -
Vra11g0353 453 SUPERFAMILY FAD/NAD(P)-binding domain 257 438 IPR036188 -
Vra11g0353 453 Gene3D - 19 433 IPR036188 -
Vra11g0353 453 Gene3D - 185 288 IPR036188 -
Vra11g0353 453 Pfam Flavin-binding monooxygenase-like 17 240 IPR020946 GO:0004499|GO:0050660|GO:0050661
Vra11g0353 453 Pfam Flavin-binding monooxygenase-like 259 372 IPR020946 GO:0004499|GO:0050660|GO:0050661
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra11g0353 Vra-Chr11 2532500 2535764 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra11g0353 - - gmx:100793203 801.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra11g0353 11 2532500 2535764 Vra11g0353 11 2532500 2535764 ECH